RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MUC22E2RYF6 1773 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-203ENST00000524927 ZNF532Q9HCE3 1301 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 OR14I1A6ND48 311 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 TEX28O15482 410 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 AFPP02771 609 aaKnown RBP7.81□□□□□ -1.16
NEDD8-203ENST00000524927 ZSCAN22P10073 491 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-203ENST00000524927 ENGP17813 658 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 TMEM62Q0P6H9 643 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 G3BP1Q13283 466 aaKnown RBP eCLIP7.81□□□□□ -1.16
NEDD8-203ENST00000524927 MTX1Q13505 466 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 CLLU1OSQ5K130 101 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 RPTNQ6XPR3 784 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 ZZZ3Q8IYH5 903 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 ZNF444Q8N0Y2 327 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-203ENST00000524927 NME8Q8N427 588 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 CAMKK1Q8N5S9 505 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 ELSPBP1Q96BH3 223 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 RPS6KC1Q96S38 1066 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 MENTQ9BUN1 341 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 PLA2G2FQ9BZM2 168 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 RBM12Q9NTZ6 932 aaKnown RBP7.81□□□□□ -1.16
NEDD8-203ENST00000524927 ST3GAL5Q9UNP4 418 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 HEMK1Q9Y5R4 338 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-203ENST00000524927 PLIN4Q96Q06 1357 aa7.81□□□□□ -1.16
NEDD8-203ENST00000524927 CENPEQ02224 2701 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 ABCB11O95342 1321 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 F8P00451 2351 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 CLEC18AA5D8T8 446 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 FOXP2O15409 715 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 EXTL3O43909 919 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 B4GALT3O60512 393 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 OPHN1O60890 802 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 ZC3H11AO75152 810 aaKnown RBP eCLIP7.8□□□□□ -1.16
NEDD8-203ENST00000524927 RPL17P18621 184 aaKnown RBP7.8□□□□□ -1.16
NEDD8-203ENST00000524927 CCNE1P24864 410 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 CD40P25942 277 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 NEK2P51955 445 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 EPHB1P54762 984 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 CXADRP78310 365 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 MAPK6Q16659 721 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 PMS2CLQ68D20 193 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 METTL7BQ6UX53 244 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 CLEC18BQ6UXF7 455 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 GRASPQ7Z6J2 395 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-203ENST00000524927 GLRX5Q86SX6 157 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 ZBTB46Q86UZ6 589 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 RASSF3Q86WH2 238 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 GALNT15Q8N3T1 639 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 ZNF610Q8N9Z0 462 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 CLEC18CQ8NCF0 446 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 TRMT61BQ9BVS5 477 aaKnown RBP7.8□□□□□ -1.16
NEDD8-203ENST00000524927 ZNF334Q9HCZ1 680 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-203ENST00000524927 AASDHPPTQ9NRN7 309 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 C14orf119Q9NWQ9 140 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 COL20A1Q9P218 1284 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 MAN2B2Q9Y2E5 1009 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 SPEF1Q9Y4P9 236 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 COL4A2P08572 1712 aa7.8□□□□□ -1.16
NEDD8-203ENST00000524927 TLN1Q9Y490 2541 aaKnown RBP7.8□□□□□ -1.16
NEDD8-203ENST00000524927 GOLGA4Q13439 2230 aaKnown RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 KIF26AQ9ULI4 1882 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 EML5Q05BV3 1969 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 RRN3P2A6NIE6 340 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 GABRDO14764 452 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 FBXO21O94952 628 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 MBD4O95243 580 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 C4BPAP04003 597 aaKnown RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 URODP06132 367 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 GALTP07902 379 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 HNRNPA1P09651 372 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 MYBP10242 640 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 MYBL2P10244 700 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 CD59P13987 128 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 MAPKAPK2P49137 400 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 ATXN3P54252 364 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 AK2P54819 239 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 PHC1P78364 1004 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 SLC14A1Q13336 389 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 SBK1Q52WX2 424 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 GPR158Q5T848 1215 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 UTP14CQ5TAP6 766 aaKnown RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 ATG14Q6ZNE5 492 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 ECHDC2Q86YB7 292 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 TMC8Q8IU68 726 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 RAVER1Q8IY67 606 aaKnown RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 ITFG1Q8TB96 612 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 ERCC4Q92889 916 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 CHMP4CQ96CF2 233 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 TSPAN17Q96FV3 270 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 DIRC2Q96SL1 478 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 MS4A5Q9H3V2 200 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 ZNF768Q9H5H4 540 aaKnown RBP7.79□□□□□ -1.16
NEDD8-203ENST00000524927 PXMP2Q9NR77 195 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 GDE1Q9NZC3 331 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 KLHL14Q9P2G3 628 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 SLC8A2Q9UPR5 921 aa7.79□□□□□ -1.16
NEDD8-203ENST00000524927 ZMYM6O95789 1325 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 MTCL1Q9Y4B5 1905 aaKnown RBP7.78□□□□□ -1.16
NEDD8-203ENST00000524927 GOLGA8AA7E2F4 631 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 GOLGA8BA8MQT2 603 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms