RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 USP3Q9Y6I4 520 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SRCAPQ6ZRS2 3230 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SYNJ2BP-COX16A0A087WUM0 186 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 BCLAF3A2AJT9 711 aaKnown RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 GOLGA6CA6NDK9 693 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 YJEFN3A6XGL0 299 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 E7ENQ6 273 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 EEF2KO00418 725 aaKnown RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 MTSS1O43312 755 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 UPP2O95045 317 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ITGB1P05556 798 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 GOLGA6DP0CG33 693 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 MX2P20592 715 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 KLRC2P26717 231 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ECHS1P30084 290 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ADRA1BP35368 520 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 PPM1AP35813 382 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 GGCXP38435 758 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 VPS41P49754 854 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 NDUFV1P49821 464 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 KPNA1P52294 538 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 SLC5A3P53794 718 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ARL4CP56559 192 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 TPI1P60174 286 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 SARNPP82979 210 aaKnown RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ADCY2Q08462 1091 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 GPR17Q13304 367 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 PDK1Q15118 436 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ZC3H12AQ5D1E8 599 aaKnown RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 CEP85LQ5SZL2 805 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 C1orf228Q6PIY5 440 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ZDHHC24Q6UX98 284 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 CENPUQ71F23 418 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 LRRTM3Q86VH5 581 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 CCDC25Q86WR0 208 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 FAM131BQ86XD5 332 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 PPIL6Q8IXY8 311 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 CMTR2Q8IYT2 770 aaKnown RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 IQCKQ8N0W5 287 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ZCCHC9Q8N567 271 aaKnown RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 PLD5Q8N7P1 536 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 FAM76AQ8TAV0 307 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 TMEM169Q96HH4 297 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ZIM3Q96PE6 472 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ROPN1BQ9BZX4 212 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 KLC2Q9H0B6 622 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 PPCSQ9HAB8 311 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 ROPN1Q9HAT0 212 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 TLR8Q9NR97 1041 aaKnown RBP10.35□□□□□ -0.75
VPS13B-212ENST00000524330 GOLGA6AQ9NYA3 693 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 COX16Q9P0S2 106 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 HSFX1Q9UBD0 423 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 FBXW11Q9UKB1 542 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 MAFFQ9ULX9 164 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 NAALADL1Q9UQQ1 740 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 SCML2Q9UQR0 700 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 HEY1Q9Y5J3 304 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 BACE2Q9Y5Z0 518 aa10.35□□□□□ -0.75
VPS13B-212ENST00000524330 TTC3P53804 2025 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 KIAA0355O15063 1070 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 POLR3GO15318 223 aaPredicted RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 RNF40O75150 1001 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 DGKIO75912 1065 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 CD48P09326 243 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 NUDT17P0C025 328 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 HSPA8P11142 646 aaKnown RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 YWHAQP27348 245 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 CCR1P32246 355 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 PHBP35232 272 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 CXCR3P49682 368 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 ARPP19P56211 112 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 MMRN1Q13201 1228 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 GPNMBQ14956 572 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 TRIP13Q15645 432 aaPredicted RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 TAF12Q16514 161 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 AGBL2Q5U5Z8 902 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 HEATR6Q6AI08 1181 aaKnown RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 HIBCHQ6NVY1 386 aaPredicted RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 DENND5BQ6ZUT9 1274 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 CYP4V2Q6ZWL3 525 aaPredicted RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 BNIPLQ7Z465 357 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 RELL1Q8IUW5 271 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 GPR65Q8IYL9 337 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 CNPY4Q8N129 248 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 TSEN2Q8NCE0 465 aaKnown RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 PDZD8Q8NEN9 1154 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 TFB1MQ8WVM0 346 aaKnown RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 PAWRQ96IZ0 340 aaKnown RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 CSPG4P5Q96PW8 444 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 KCTD15Q96SI1 283 aaPredicted RBP10.34□□□□□ -0.75
VPS13B-212ENST00000524330 SH3GL2Q99962 352 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 HERPUD2Q9BSE4 406 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 TMEM121Q9BTD3 319 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 OSBPL2Q9H1P3 480 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 CATSPERBQ9H7T0 1116 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 PRDM5Q9NQX1 630 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms