RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 C12orf50Q8NA57 414 aaPredicted RBP11.42□□□□□ -0.58
PVT1-216ENST00000523068 EHBP1Q8NDI1 1231 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 KCTD13Q8WZ19 329 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 PLD4Q96BZ4 506 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 SPACA7Q96KW9 195 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 SRRTQ9BXP5 876 aaKnown RBP11.42□□□□□ -0.58
PVT1-216ENST00000523068 TPSD1Q9BZJ3 242 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 ULBP1Q9BZM6 244 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 DUSP15Q9H1R2 295 aaPredicted RBP11.42□□□□□ -0.58
PVT1-216ENST00000523068 CNGB3Q9NQW8 809 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.42□□□□□ -0.58
PVT1-216ENST00000523068 DNAH14Q0VDD8 3507 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 GPR179Q6PRD1 2367 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.41□□□□□ -0.58
PVT1-216ENST00000523068 SLC12A8A0AV02 714 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 ZBTB24O43167 697 aaPredicted RBP11.41□□□□□ -0.58
PVT1-216ENST00000523068 CYBBP04839 570 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 ZNF806P0C7X5 589 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 NTSR1P30989 418 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 CORO1AP31146 461 aaKnown RBP11.41□□□□□ -0.58
PVT1-216ENST00000523068 GBP1P32455 592 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 DGKGP49619 791 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 ATXN1P54253 815 aaKnown RBP11.41□□□□□ -0.58
PVT1-216ENST00000523068 BYSLQ13895 437 aaKnown RBP11.41□□□□□ -0.58
PVT1-216ENST00000523068 E2F5Q15329 346 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 CNGA2Q16280 664 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 AASDHQ4L235 1098 aaPredicted RBP11.41□□□□□ -0.58
PVT1-216ENST00000523068 EMC10Q5UCC4 262 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 SCML4Q8N228 414 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 MDGA1Q8NFP4 955 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 LMO3Q8TAP4 145 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 UBA3Q8TBC4 463 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 RNF139Q8WU17 664 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 FAM81BQ96LP2 452 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 NUP62CLQ9H1M0 184 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 ABCC13Q9NSE7 274 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 BCCIPQ9P287 314 aaKnown RBP eCLIP11.41□□□□□ -0.58
PVT1-216ENST00000523068 RWDD2AQ9UIY3 292 aa11.41□□□□□ -0.58
PVT1-216ENST00000523068 TNRC6BQ9UPQ9 1833 aaKnown RBP11.4□□□□□ -0.58
PVT1-216ENST00000523068 ANTXRLA6NF34 631 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 TULP2O00295 520 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 DCLK1O15075 740 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 ADAM23O75077 832 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 KLKB1P03952 638 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 HMBSP08397 361 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
PVT1-216ENST00000523068 LCP1P13796 627 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 MPLP40238 635 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 HARS2P49590 506 aaKnown RBP11.4□□□□□ -0.58
PVT1-216ENST00000523068 GSE1Q14687 1217 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 CAMK4Q16566 473 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 ZSCAN23Q3MJ62 389 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 PKDCCQ504Y2 493 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 PLA2G2CQ5R387 149 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 BSPRYQ5W0U4 402 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 RRAGAQ7L523 313 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 ENOSF1Q7L5Y1 443 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 DENND1CQ8IV53 801 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 FMNL3Q8IVF7 1028 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 CPXM2Q8N436 756 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 RBBP8NLQ8NC74 664 aaPredicted RBP11.4□□□□□ -0.58
PVT1-216ENST00000523068 SLC35F5Q8WV83 523 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 HMGB4Q8WW32 186 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 IRGQQ8WZA9 623 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 GOLGA1Q92805 767 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 VPS45Q9NRW7 570 aa11.4□□□□□ -0.58
PVT1-216ENST00000523068 AGO1Q9UL18 857 aaKnown RBP11.4□□□□□ -0.58
PVT1-216ENST00000523068 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.4□□□□□ -0.58
PVT1-216ENST00000523068 HBS1LQ9Y450 684 aaKnown RBP11.4□□□□□ -0.58
PVT1-216ENST00000523068 TCRBV21S2A2A0A5A6 115 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 YJEFN3A6XGL0 299 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 E7ENQ6 273 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 M0QYV0 167 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 SLC30A4O14863 429 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 NPC1O15118 1278 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 TRIM24O15164 1050 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 FBXO21O94952 628 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 PENKP01210 267 aaPredicted RBP11.39□□□□□ -0.59
PVT1-216ENST00000523068 HOXB2P14652 356 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 HNRNPLP14866 589 aaKnown RBP eCLIP11.39□□□□□ -0.596e-25■■■□□ 16
PVT1-216ENST00000523068 ZNF132P52740 706 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 LIMK1P53667 647 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 DAOAP59103 153 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 ZNF445P59923 1031 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 CREB5Q02930 508 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 TRIP4Q15650 581 aaPredicted RBP11.39□□□□□ -0.59
PVT1-216ENST00000523068 FYB2Q5VWT5 728 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 PMS2CLQ68D20 193 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 BHLHA9Q7RTU4 235 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 CREBRFQ8IUR6 639 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 ARHGEF19Q8IW93 802 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 CHPFQ8IZ52 775 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 MLKLQ8NB16 471 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 OLIG1Q8TAK6 271 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 UCMAQ8WVF2 138 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 TFAP2BQ92481 460 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 DDX1Q92499 740 aaKnown RBP11.39□□□□□ -0.59
PVT1-216ENST00000523068 BHMTQ93088 406 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms