RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SULT1E1P49888 294 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 TUBB4BP68371 445 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 PABPC1LQ4VXU2 614 aaKnown RBP12.91□□□□□ -0.34
PABPC1-219ENST00000522387 ZFYVE27Q5T4F4 411 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 HDXQ7Z353 690 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 RNF139Q8WU17 664 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 CASP10Q92851 521 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 RHOXF2Q9BQY4 288 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 PRKD2Q9BZL6 878 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 IL21Q9HBE4 155 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 CYLDQ9NQC7 956 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 TRPM5Q9NZQ8 1165 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 ADAM21Q9UKJ8 722 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 NCANO14594 1321 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 PATJQ8NI35 1801 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 CTAGE15A4D2H0 777 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 CTAGE8P0CG41 777 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 IRF1P10914 325 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 COMTP21964 271 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 MATKP42679 507 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 AMPD2Q01433 879 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 WHAMMP3Q1A5X7 153 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 TXNRD3NBQ6F5E7 133 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 PPP1R2P3Q6NXS1 205 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 SYCE2Q6PIF2 218 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 CTAGE6Q86UF2 777 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 FAM131BQ86XD5 332 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 CTAGE4Q8IX94 777 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 ARL14EPQ8N8R7 260 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-219ENST00000522387 NOA1Q8NC60 698 aaKnown RBP12.9□□□□□ -0.34
PABPC1-219ENST00000522387 ITFG1Q8TB96 612 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 GUCD1Q96NT3 240 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 GKN1Q9NS71 199 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 ABCC13Q9NSE7 274 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 DDIT4Q9NX09 232 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 CLEC1BQ9P126 229 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 RASAL2Q9UJF2 1139 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 ALG6Q9Y672 507 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 SPOPO43791 374 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 XYLBO75191 536 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 FOSL2P15408 326 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 PTPN2P17706 415 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 LMAN1P49257 510 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 TEAD2Q15562 447 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 ATP13A4Q4VNC1 1196 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 ARFGAP1Q8N6T3 406 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 EFHBQ8N7U6 833 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 RNF34Q969K3 372 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 MYRFLQ96LU7 910 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 FAM204AQ9H8W3 233 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 ZWILCHQ9H900 591 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 PSD3Q9NYI0 1048 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 IL37Q9NZH6 218 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 C2orf16Q68DN1 1984 aa12.9□□□□□ -0.34
PABPC1-219ENST00000522387 USP34Q70CQ2 3546 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 FAM92AA1XBS5 289 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 COCHO43405 550 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 MOCS2O96007 188 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 F11P03951 625 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 KCNA5P22460 613 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 LTBRP36941 435 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 ZNF143P52747 638 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 DQX1Q8TE96 717 aaKnown RBP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 TTLL2Q9BWV7 592 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 LRRC3Q9BY71 257 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 PIGVQ9NUD9 493 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 TMEM51Q9NW97 253 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■□□ 15.6
PABPC1-219ENST00000522387 DPP7Q9UHL4 492 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 NOTCH4Q99466 2003 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 LRCH4O75427 683 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 TRUB2O95900 331 aaKnown RBP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 CKMP06732 381 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 NOS2P35228 1153 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 MARCKSL1P49006 195 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 ADAM15Q13444 863 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 POTEHQ6S545 545 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 GET4Q7L5D6 327 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 ZSWIM3Q96MP5 696 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 CDCA3Q99618 268 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 SFXN1Q9H9B4 322 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 ZDHHC7Q9NXF8 308 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 SMARCAL1Q9NZC9 954 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 EHD2Q9NZN4 543 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 VPS18Q9P253 973 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 MRPS23Q9Y3D9 190 aaKnown RBP12.89□□□□□ -0.35
PABPC1-219ENST00000522387 SAR1BQ9Y6B6 198 aa12.89□□□□□ -0.35
PABPC1-219ENST00000522387 TMEM265A0A087WTH1 108 aa12.88□□□□□ -0.35
PABPC1-219ENST00000522387 A0A0A6YYK5 440 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-219ENST00000522387 SART1O43290 800 aaKnown RBP12.88□□□□□ -0.35
PABPC1-219ENST00000522387 DAB1O75553 588 aa12.88□□□□□ -0.35
PABPC1-219ENST00000522387 RNF8O76064 485 aa12.88□□□□□ -0.35
PABPC1-219ENST00000522387 RALAP11233 206 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms