RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TADA2BQ86TJ2 420 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 TAC4Q86UU9 113 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 TMC8Q8IU68 726 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 RNF139Q8WU17 664 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 TEKT4Q8WW24 435 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 EDEM1Q92611 657 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 ALG3Q92685 438 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 KRT35Q92764 455 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 SERPINB11Q96P15 392 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 ADAM33Q9BZ11 813 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 TTYH1Q9H313 450 aaPredicted RBP13.61□□□□□ -0.23
CPNE3-205ENST00000522240 KDM4CQ9H3R0 1056 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 OSER1Q9NX31 292 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 TRPM5Q9NZQ8 1165 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 CDC23Q9UJX2 597 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 HCFC2Q9Y5Z7 792 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 MRFAP1Q9Y605 127 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 M0QYT0 321 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 KCNK3O14649 394 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 MDM4O15151 490 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 FGF19O95750 216 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 TRUB2O95900 331 aaKnown RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 SPATA31D3P0C874 917 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 RARGP13631 454 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 TCF4P15884 667 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 EPCAMP16422 314 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 TFE3P19532 575 aaPredicted RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 GBP1P32455 592 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 SSR1P43307 286 aaKnown RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 PGFP49763 221 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 PITX1P78337 314 aaPredicted RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 EIF4EBP2Q13542 120 aaPredicted RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 WHAMMP3Q1A5X7 153 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 SH3PXD2AQ5TCZ1 1133 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 DCAF12L1Q5VU92 463 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 DAB2IPQ5VWQ8 1189 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 KLHDC10Q6PID8 442 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 SPATA31D4Q6ZUB0 917 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 ADGRD2Q7Z7M1 963 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 PSTKQ8IV42 348 aaKnown RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 LEMD2Q8NC56 503 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 EXD1Q8NHP7 514 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 NTAN1Q96AB6 310 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 RBM41Q96IZ5 413 aaKnown RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 ZNF576Q9H609 170 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 NSUN3Q9H649 340 aaKnown RBP13.6□□□□□ -0.23
CPNE3-205ENST00000522240 TLE6Q9H808 572 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 FAM204AQ9H8W3 233 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 L2HGDHQ9H9P8 463 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 DZANK1Q9NVP4 752 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 DDIT4Q9NX09 232 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 LMCD1Q9NZU5 365 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 RNF14Q9UBS8 474 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 MUC3AQ02505 3323 aa13.6□□□□□ -0.23
CPNE3-205ENST00000522240 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 ZNF840PA6NDX5 716 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 TLR5O60602 858 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 XYLBO75191 536 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 KRT1P04264 644 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 FOSL2P15408 326 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 IL1R2P27930 398 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 CDC25CP30307 473 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 GJC1P36383 396 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 DNA2P51530 1060 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 EPHA5P54756 1037 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 KCNC3Q14003 757 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 CLUL1Q15846 466 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
CPNE3-205ENST00000522240 BOLA3Q53S33 107 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 BRMS1LQ5PSV4 323 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 SEL1L2Q5TEA6 688 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 SND1Q7KZF4 910 aaKnown RBP eCLIP13.59□□□□□ -0.23
CPNE3-205ENST00000522240 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 RASGEF1CQ8N431 466 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 CASP10Q92851 521 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 GCNAQ96QF7 691 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 PSMB7Q99436 277 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 SNRNP25Q9BV90 132 aaKnown RBP13.59□□□□□ -0.23
CPNE3-205ENST00000522240 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 IL21Q9HBE4 155 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 ZNF334Q9HCZ1 680 aaPredicted RBP13.59□□□□□ -0.23
CPNE3-205ENST00000522240 WDR6Q9NNW5 1121 aaKnown RBP13.59□□□□□ -0.23
CPNE3-205ENST00000522240 ASAH2Q9NR71 780 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 PIGVQ9NUD9 493 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 CALCOCO1Q9P1Z2 691 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 CHD7Q9P2D1 2997 aa13.59□□□□□ -0.23
CPNE3-205ENST00000522240 ZNF487B1APH4 448 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 F11P03951 625 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 PFKLP17858 780 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 PTPN7P35236 360 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 NRIP1P48552 1158 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 CXCR3P49682 368 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 COPS2P61201 443 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 CKAP4Q07065 602 aaKnown RBP13.58□□□□□ -0.24
CPNE3-205ENST00000522240 SCAPQ12770 1279 aa13.58□□□□□ -0.24
CPNE3-205ENST00000522240 NME3Q13232 169 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms