RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CEP120Q8N960 986 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 TTC13Q8NBP0 860 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 KCNV2Q8TDN2 545 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 SSC4DQ8WTU2 575 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 SGF29Q96ES7 293 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 MTMR9Q96QG7 549 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 MED15Q96RN5 788 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 SEPT5Q99719 369 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 ORAI3Q9BRQ5 295 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 TMEM60Q9H2L4 133 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 TM9SF3Q9HD45 589 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 ITM2CQ9NQX7 267 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 THSD1Q9NS62 852 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 BARHL2Q9NY43 387 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 HSFX1Q9UBD0 423 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 ADAMTS1Q9UHI8 967 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 HOOK1Q9UJC3 728 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 PPME1Q9Y570 386 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 OR6C75A6NL08 312 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 N4BP3O15049 544 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 NOBOXO60393 691 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 AGFG2O95081 481 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 SMC2O95347 1197 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 ATP1A3P13637 1013 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 QARSP47897 775 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 GRIA4P48058 902 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 GPR15P49685 360 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 TERF1P54274 439 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 INHBCP55103 352 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 TPM4P67936 248 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 MYL5Q02045 173 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 DPYDQ12882 1025 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 MYBPC2Q14324 1141 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 E2F4Q16254 413 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 INF2Q27J81 1249 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 INAVAQ3KP66 663 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 MGAT5BQ3V5L5 792 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 GALNT17Q6IS24 598 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 KIAA1324Q6UXG2 1013 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 USP53Q70EK8 1073 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 TMC6Q7Z403 805 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 LRRC8AQ8IWT6 810 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 ETFBKMTQ8IXQ9 262 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 EXOC8Q8IYI6 725 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 FAM177A1Q8N128 213 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 ARL14EPQ8N8R7 260 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 MLKLQ8NB16 471 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 CCDC148Q8NFR7 591 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 OR10T2Q8NGX3 314 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 HTR3CQ8WXA8 447 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 SLC46A1Q96NT5 459 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 GABRG3Q99928 467 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 ZMYND12Q9H0C1 365 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 TMEM206Q9H813 350 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 OSGEPQ9NPF4 335 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 FANCLQ9NW38 375 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 ATXN7L1Q9ULK2 861 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
CTNNA1-227ENST00000521387 NBEAL1Q6ZS30 2694 aa7.77□□□□□ -1.16
CTNNA1-227ENST00000521387 C2orf78A6NCI8 922 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 TBC1D3BA6NDS4 549 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 CDRT15L2A8MXV6 281 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 WASH3PC4AMC7 463 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 SCAMP3O14828 347 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 MTSS1O43312 755 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 TPM2P07951 284 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 CKMT2P17540 419 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 WT1P19544 449 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 ACP1P24666 158 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 YWHABP31946 246 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 RPL9P32969 192 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 TUFMP49411 452 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 AARSP49588 968 aaKnown RBP eCLIP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 TPMTP51580 245 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 CYP4F2P78329 520 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 CCZ1BP86790 482 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 CCZ1P86791 482 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 DMP1Q13316 513 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 VEPH1Q14D04 833 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 XKR9Q5GH70 373 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 ARL6IP4Q66PJ3 421 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 CDCA2Q69YH5 1023 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 MAMDC2Q7Z304 686 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 FILIP1Q7Z7B0 1213 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 LRRTM3Q86VH5 581 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 ENOX1Q8TC92 643 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 PIGOQ8TEQ8 1089 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 MRPS31Q92665 395 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 PRIMPOLQ96LW4 560 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 MKRN2Q9H000 416 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 C6orf106Q9H6K1 298 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 PRMT7Q9NVM4 692 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 IMPACTQ9P2X3 320 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 ARHGAP26Q9UNA1 814 aa7.77□□□□□ -1.17
CTNNA1-227ENST00000521387 KIF26BQ2KJY2 2108 aa7.76□□□□□ -1.17
CTNNA1-227ENST00000521387 NEMFO60524 1076 aa7.76□□□□□ -1.17
CTNNA1-227ENST00000521387 IGLV3-19P01714 112 aa7.76□□□□□ -1.17
CTNNA1-227ENST00000521387 ITGAVP06756 1048 aa7.76□□□□□ -1.17
CTNNA1-227ENST00000521387 USP17L7P0C7H9 530 aa7.76□□□□□ -1.17
CTNNA1-227ENST00000521387 HAPLN1P10915 354 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms