RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 LRRC3BQ96PB8 259 aa13.05□□□□□ -0.32
HDAC2-211ENST00000521233 FAM83CQ9BQN1 747 aa13.05□□□□□ -0.32
HDAC2-211ENST00000521233 FAM204AQ9H8W3 233 aa13.05□□□□□ -0.32
HDAC2-211ENST00000521233 ARHGEF3Q9NR81 526 aa13.05□□□□□ -0.32
HDAC2-211ENST00000521233 COL4A2P08572 1712 aa13.05□□□□□ -0.32
HDAC2-211ENST00000521233 VCANP13611 3396 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 GOLGA8SH3BPF8 625 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 ARNTLO00327 626 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 DDX3XO00571 662 aaKnown RBP eCLIP13.04□□□□□ -0.324e-12■■■■□ 26.6
HDAC2-211ENST00000521233 RTN2O75298 545 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 STC2O76061 302 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 ADH1CP00326 375 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 MYBL1P10243 752 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 DESP17661 470 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 GBP1P32455 592 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 NOS2P35228 1153 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 MATKP42679 507 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 HARS2P49590 506 aaKnown RBP13.04□□□□□ -0.32
HDAC2-211ENST00000521233 AMPD2Q01433 879 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 PRKCQQ04759 706 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 CCDC173Q0VFZ6 552 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 MLF2Q15773 248 aaPredicted RBP13.04□□□□□ -0.32
HDAC2-211ENST00000521233 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 HTR3DQ70Z44 454 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 TAC4Q86UU9 113 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 UNC45BQ8IWX7 931 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 RIN3Q8TB24 985 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC2-211ENST00000521233 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 C8orf33Q9H7E9 229 aaPredicted RBP13.04□□□□□ -0.32
HDAC2-211ENST00000521233 GKN1Q9NS71 199 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC2-211ENST00000521233 NAALADL1Q9UQQ1 740 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 TLR6Q9Y2C9 796 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 WNT6Q9Y6F9 365 aa13.04□□□□□ -0.32
HDAC2-211ENST00000521233 IRAK2O43187 625 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 MSI1O43347 362 aaKnown RBP13.03□□□□□ -0.32
HDAC2-211ENST00000521233 GRAP2O75791 330 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 ADCY5O95622 1261 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 TRUB2O95900 331 aaKnown RBP13.03□□□□□ -0.32
HDAC2-211ENST00000521233 IGLV3-27P01718 113 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 APOEP02649 317 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 FYNP06241 537 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 SLC2A3P11169 496 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 CORO1AP31146 461 aaKnown RBP13.03□□□□□ -0.32
HDAC2-211ENST00000521233 ADKP55263 362 aaKnown RBP13.03□□□□□ -0.32
HDAC2-211ENST00000521233 TBX4P57082 545 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 ZXDBP98169 803 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 RUNX3Q13761 415 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 TAF5Q15542 800 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 EML3Q32P44 896 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 Q6ZNB5 142 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 MCOLN2Q8IZK6 566 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.326e-8■□□□□ 9.9
HDAC2-211ENST00000521233 ASIC4Q96FT7 647 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 SELENOOQ9BVL4 669 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
HDAC2-211ENST00000521233 ARHGAP20Q9P2F6 1191 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 IMPACTQ9P2X3 320 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 ADAMTS1Q9UHI8 967 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 SFMBT1Q9UHJ3 866 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 MRPS17Q9Y2R5 130 aaKnown RBP13.03□□□□□ -0.32
HDAC2-211ENST00000521233 SCINQ9Y6U3 715 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 PIAS3Q9Y6X2 628 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 TICRRQ7Z2Z1 1910 aa13.03□□□□□ -0.32
HDAC2-211ENST00000521233 TMEM221A6NGB7 291 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 M0R296 226 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 MAN2B1O00754 1011 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 F9P00740 461 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 IGLV3-25P01717 112 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 HMBSP08397 361 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 KRT3P12035 628 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 SDC4P31431 198 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 CHKAP35790 457 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.33
HDAC2-211ENST00000521233 SLC11A2P49281 568 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 RNASE9P60153 205 aaKnown RBP13.02□□□□□ -0.33
HDAC2-211ENST00000521233 SLC44A4Q53GD3 710 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 C2CD6Q53TS8 623 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 SYPL2Q5VXT5 272 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 WDR59Q6PJI9 974 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 TPRG1Q6ZUI0 275 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 SND1Q7KZF4 910 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDAC2-211ENST00000521233 RALGPS2Q86X27 583 aaPredicted RBP13.02□□□□□ -0.33
HDAC2-211ENST00000521233 BBS7Q8IWZ6 715 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 SIX5Q8N196 739 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 ZNF653Q96CK0 615 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 PANX2Q96RD6 677 aa13.02□□□□□ -0.33
HDAC2-211ENST00000521233 DDX50Q9BQ39 737 aaKnown RBP13.02□□□□□ -0.33
HDAC2-211ENST00000521233 DDX23Q9BUQ8 820 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms