RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 PSEN1P49768 467 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 NDST1P52848 882 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 COG7P83436 770 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 KNOP1Q1ED39 458 aaKnown RBP12.1□□□□□ -0.47
MRPS28-206ENST00000520946 BMT2Q1RMZ1 405 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 SERPINA13PQ6UXR4 307 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 PAQR9Q6ZVX9 377 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 RSRC2Q7L4I2 434 aaKnown RBP12.1□□□□□ -0.47
MRPS28-206ENST00000520946 ANKS1BQ7Z6G8 1248 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 GLRX5Q86SX6 157 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 UNC93AQ86WB7 457 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 CCDC150Q8NCX0 1101 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 DDI1Q8WTU0 396 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 USP28Q96RU2 1077 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 DCLK3Q9C098 648 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
MRPS28-206ENST00000520946 IL21RQ9HBE5 538 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
MRPS28-206ENST00000520946 ZFYVE26Q68DK2 2539 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 PKD1L2Q7Z442 2459 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 MYH10P35580 1976 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 A0A1B0GVT2 93 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 SPTLC2O15270 562 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 TIMM44O43615 452 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 PIK3CAP42336 1068 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 CSNK1EP49674 416 aaKnown RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 AFF3P51826 1226 aaKnown RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 CYP4F3Q08477 520 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 KLHDC10Q6PID8 442 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 EPM2AIP1Q7L775 607 aaPredicted RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 TMPRSS7Q7RTY8 843 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 TAF4BQ92750 862 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 ELMO3Q96BJ8 720 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 DCBLD2Q96PD2 775 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 VRTNQ9H8Y1 702 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 CSNK1G1Q9HCP0 422 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 KBTBD4Q9NVX7 518 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 THAP10Q9P2Z0 257 aaPredicted RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 PLA2G4CQ9UP65 541 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 FNDC3AQ9Y2H6 1198 aaKnown RBP12.09□□□□□ -0.47
MRPS28-206ENST00000520946 PCDH15Q96QU1 1955 aa12.09□□□□□ -0.47
MRPS28-206ENST00000520946 LAMA1P25391 3075 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 TRABD2BA6NFA1 517 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 LRRIQ3A6PVS8 624 aaPredicted RBP12.08□□□□□ -0.48
MRPS28-206ENST00000520946 TNFSF14O43557 240 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 CBFA2T3O75081 653 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 STC2O76061 302 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 CAPNS1P04632 268 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 ATXN1LP0C7T5 689 aaKnown RBP12.08□□□□□ -0.48
MRPS28-206ENST00000520946 SYT1P21579 422 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 CORO1AP31146 461 aaKnown RBP12.08□□□□□ -0.48
MRPS28-206ENST00000520946 IL12RB1P42701 662 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 PGFP49763 221 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 MFAP3P55082 362 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 SLC8A3P57103 927 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 EFEMP1Q12805 493 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 ZNF234Q14588 700 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 FNDC3BQ53EP0 1204 aaKnown RBP12.08□□□□□ -0.48
MRPS28-206ENST00000520946 CRYBG2Q8N1P7 616 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 ARHGAP18Q8N392 663 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 ZMIZ2Q8NF64 920 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 GANCQ8TET4 914 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 PARD3BQ8TEW8 1205 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 NT5C1AQ9BXI3 368 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 SDCBP2Q9H190 292 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 BLZF1Q9H2G9 400 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 MAGEF1Q9HAY2 307 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
MRPS28-206ENST00000520946 ELOVL2Q9NXB9 296 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 FAM13BQ9NYF5 915 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 SLC27A6Q9Y2P4 619 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 PCDHGB2Q9Y5G2 931 aa12.08□□□□□ -0.48
MRPS28-206ENST00000520946 C4BPAP04003 597 aaKnown RBP12.07□□□□□ -0.48
MRPS28-206ENST00000520946 GRK6P43250 576 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 AFMP43652 599 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 C21orf59P57076 290 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 EIF4HQ15056 248 aaKnown RBP12.07□□□□□ -0.48
MRPS28-206ENST00000520946 GEN1Q17RS7 908 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 CEP135Q66GS9 1140 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 CLEC20AQ6ZU45 233 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 DENND1CQ8IV53 801 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 CEP57L1Q8IYX8 460 aa12.07□□□□□ -0.48
MRPS28-206ENST00000520946 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
MRPS28-206ENST00000520946 SKA1Q96BD8 255 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms