RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 FBXO10Q9UK96 956 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 COQ4Q9Y3A0 265 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 SLC16A3O15427 465 aaKnown RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 ZBTB24O43167 697 aaPredicted RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 AP5Z1O43299 807 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 PENKP01210 267 aaPredicted RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 NOVA1P51513 510 aaKnown RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 FKBP3Q00688 224 aaKnown RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 EFEMP1Q12805 493 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 LMAN2Q12907 356 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 DCAF17Q5H9S7 520 aaPredicted RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 TCERG1LQ5VWI1 586 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 PEAR1Q5VY43 1037 aaPredicted RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 KIAA1211LQ6NV74 962 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 GSDMAQ96QA5 445 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 TSG101Q99816 390 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 NUSAP1Q9BXS6 441 aaKnown RBP20.62■□□□□ 0.89
PABPC1-215ENST00000520804 DCLK3Q9C098 648 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 PILRBQ9UKJ0 227 aa20.62■□□□□ 0.89
PABPC1-215ENST00000520804 GFRA2O00451 464 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 HMBSP08397 361 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 NDUFV2P19404 249 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 CORO1AP31146 461 aaKnown RBP20.61■□□□□ 0.89
PABPC1-215ENST00000520804 HOXD12P35452 270 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 CHKAP35790 457 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 SLC8A3P57103 927 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 YWHAGP61981 247 aaKnown RBP eCLIP20.61■□□□□ 0.89
PABPC1-215ENST00000520804 RPL6Q02878 288 aaKnown RBP20.61■□□□□ 0.89
PABPC1-215ENST00000520804 FYB2Q5VWT5 728 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 ANKRD40Q6AI12 368 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 CACNA2D2Q9NY47 1150 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 SLC27A6Q9Y2P4 619 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 RAD54BQ9Y620 910 aa20.61■□□□□ 0.89
PABPC1-215ENST00000520804 ATXN2Q99700 1313 aaKnown RBP20.6■□□□□ 0.89
PABPC1-215ENST00000520804 IGHV1OR15-9A0A0B4J2B8 117 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 GIPC1O14908 333 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 ZNF217O75362 1048 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 ITPKAP23677 461 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 PMS1P54277 932 aaKnown RBP20.6■□□□□ 0.89
PABPC1-215ENST00000520804 CUL2Q13617 745 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 ST3GAL2Q16842 350 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 GOLGA7BQ2TAP0 167 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 SH3PXD2AQ5TCZ1 1133 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 PM20D1Q6GTS8 502 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 SLC23A3Q6PIS1 610 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 RSRC2Q7L4I2 434 aaKnown RBP20.6■□□□□ 0.89
PABPC1-215ENST00000520804 ENGASEQ8NFI3 743 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 SPATA20Q8TB22 786 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 MARCH2Q9P0N8 246 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 AGO1Q9UL18 857 aaKnown RBP20.6■□□□□ 0.89
PABPC1-215ENST00000520804 STRIP2Q9ULQ0 834 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 CEP192Q8TEP8 1941 aa20.6■□□□□ 0.89
PABPC1-215ENST00000520804 GOLGA6L4A6NEF3 574 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 TULP2O00295 520 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 SMC2O95347 1197 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 ENGP17813 658 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 CSRP1P21291 193 aaKnown RBP20.59■□□□□ 0.89
PABPC1-215ENST00000520804 TKTL1P51854 596 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 MFAP3P55082 362 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 PDE4CQ08493 712 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 UAP1L1Q3KQV9 507 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 BHLHA9Q7RTU4 235 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 DEFB119Q8N690 84 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 ERLEC1Q96DZ1 483 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 ULBP1Q9BZM6 244 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 TSPAN16Q9UKR8 245 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 EPG5Q9HCE0 2579 aa20.59■□□□□ 0.89
PABPC1-215ENST00000520804 KMT2BQ9UMN6 2715 aaPredicted RBP20.58■□□□□ 0.89
PABPC1-215ENST00000520804 SLC12A8A0AV02 714 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 WASH3PC4AMC7 463 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 XPO1O14980 1071 aaKnown RBP20.58■□□□□ 0.89
PABPC1-215ENST00000520804 KRT37O76014 449 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 ZBED1O96006 694 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 CEACAM1P13688 526 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 BCAT1P54687 386 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 YWHAEP62258 255 aaKnown RBP20.58■□□□□ 0.89
PABPC1-215ENST00000520804 LRRC63Q05C16 580 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 ZNF33AQ06730 810 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 GEN1Q17RS7 908 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 SGO2Q562F6 1265 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 DENND1CQ8IV53 801 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 CPXM2Q8N436 756 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 CEP76Q8TAP6 659 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 ERCC4Q92889 916 aaPredicted RBP20.58■□□□□ 0.89
PABPC1-215ENST00000520804 SMARCE1Q969G3 411 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 SLC35C1Q96A29 364 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 MRGPRX1Q96LB2 322 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 GTPBP4Q9BZE4 634 aaKnown RBP20.58■□□□□ 0.89
PABPC1-215ENST00000520804 ARMCX3Q9UH62 379 aaPredicted RBP20.58■□□□□ 0.89
PABPC1-215ENST00000520804 CYP8B1Q9UNU6 501 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 STON1Q9Y6Q2 735 aa20.58■□□□□ 0.89
PABPC1-215ENST00000520804 TRIM49BA6NDI0 452 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 CYBBP04839 570 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 MAPK8P45983 427 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 ZNF252P-AS1Q0IIN9 211 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 DUOXA1Q1HG43 343 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 FAM217AQ8IXS0 508 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 NDRG1Q92597 394 aaKnown RBP20.57■□□□□ 0.88
PABPC1-215ENST00000520804 PLD4Q96BZ4 506 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 SLC6A17Q9H1V8 727 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms