RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 DPCDQ9BVM2 203 aaPredicted RBP8.3□□□□□ -1.08
LSM1-202ENST00000520286 AGXT2Q9BYV1 514 aa8.3□□□□□ -1.08
LSM1-202ENST00000520286 PAIP1Q9H074 479 aaKnown RBP8.3□□□□□ -1.08
LSM1-202ENST00000520286 SERHL2Q9H4I8 314 aa8.3□□□□□ -1.08
LSM1-202ENST00000520286 ZCCHC4Q9H5U6 513 aa8.3□□□□□ -1.08
LSM1-202ENST00000520286 FBXO28Q9NVF7 368 aa8.3□□□□□ -1.08
LSM1-202ENST00000520286 DYTNA2CJ06 578 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 VWA3AA6NCI4 1184 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 ACRV1P26436 265 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 THBS4P35443 961 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 LIPAP38571 399 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 DGKQP52824 942 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 RNASELQ05823 741 aaKnown RBP8.29□□□□□ -1.08
LSM1-202ENST00000520286 KCNJ12Q14500 433 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 AASDHQ4L235 1098 aaPredicted RBP8.29□□□□□ -1.08
LSM1-202ENST00000520286 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 TMPRSS6Q8IU80 811 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 UCMAQ8WVF2 138 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 LPIN2Q92539 896 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 ZUFSPQ96AP4 578 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 R3HDM4Q96D70 268 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 RSPRY1Q96DX4 576 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 ADAM2Q99965 735 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 TBX20Q9UMR3 447 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 AFG3L2Q9Y4W6 797 aa8.29□□□□□ -1.08
LSM1-202ENST00000520286 A8MVJ9 347 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 M0QYT0 321 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 CPA1P15085 419 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 BMPR1AP36894 532 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 CLCN2P51788 898 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 CASP6P55212 293 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 NFIXQ14938 502 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 AAK1Q2M2I8 961 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 ZNF484Q5JVG2 852 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
LSM1-202ENST00000520286 ANKRD40Q6AI12 368 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 GRHL2Q6ISB3 625 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 P3H2Q8IVL5 708 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 FSIP1Q8NA03 581 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 SSH3Q8TE77 659 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 RFFLQ8WZ73 363 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 PTCD3Q96EY7 689 aaKnown RBP8.28□□□□□ -1.08
LSM1-202ENST00000520286 VPS50Q96JG6 964 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 RMI1Q9H9A7 625 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 PLEKHA2Q9HB19 425 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 CD248Q9HCU0 757 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 OLA1Q9NTK5 396 aaKnown RBP8.28□□□□□ -1.08
LSM1-202ENST00000520286 TBC1D22BQ9NU19 505 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 AURKAIP1Q9NWT8 199 aaPredicted RBP8.28□□□□□ -1.08
LSM1-202ENST00000520286 AASSQ9UDR5 926 aa8.28□□□□□ -1.08
LSM1-202ENST00000520286 UBE2J1Q9Y385 318 aaPredicted RBP8.28□□□□□ -1.08
LSM1-202ENST00000520286 SEPT4O43236 478 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 KLK10O43240 276 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
LSM1-202ENST00000520286 FESP07332 822 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 RHOP08100 348 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
LSM1-202ENST00000520286 PDE1CQ14123 709 aaPredicted RBP8.27□□□□□ -1.09
LSM1-202ENST00000520286 SF3B3Q15393 1217 aaKnown RBP8.27□□□□□ -1.09
LSM1-202ENST00000520286 TBCCQ15814 346 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 TREML2Q5T2D2 321 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 TEDDM1Q5T9Z0 273 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 CCDC30Q5VVM6 783 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 ACAD10Q6JQN1 1059 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.27□□□□□ -1.09
LSM1-202ENST00000520286 FAM71DQ8N9W8 422 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 MYCBPAPQ8TBZ2 947 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 XAGE5Q8WWM1 108 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 STAMQ92783 540 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 FUBP1Q96AE4 644 aaKnown RBP8.27□□□□□ -1.09
LSM1-202ENST00000520286 FKBP10Q96AY3 582 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 WDYHV1Q96HA8 205 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 TEPSINQ96N21 525 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 NEUROD6Q96NK8 337 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 DEF6Q9H4E7 631 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 KCNK9Q9NPC2 374 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 RXFP3Q9NSD7 469 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 TCAF1Q9Y4C2 921 aa8.27□□□□□ -1.09
LSM1-202ENST00000520286 UNC119BA6NIH7 251 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 SAC3D1A6NKF1 404 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 DBX1A6NMT0 343 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 M0QZQ0 153 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 HEXIM1O94992 359 aaKnown RBP8.26□□□□□ -1.09
LSM1-202ENST00000520286 ITGB3P05106 788 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 ALADP13716 330 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 NXPH1P58417 271 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 RBM6P78332 1123 aaKnown RBP8.26□□□□□ -1.09
LSM1-202ENST00000520286 DCTN1Q14203 1278 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 NBPF8Q3BBV2 869 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 ANO7Q6IWH7 933 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 TOR1AIP2Q8NFQ8 470 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 CENPIQ92674 756 aaPredicted RBP8.26□□□□□ -1.09
LSM1-202ENST00000520286 RBM17Q96I25 401 aaKnown RBP8.26□□□□□ -1.09
LSM1-202ENST00000520286 FAR2Q96K12 515 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 ACAD9Q9H845 621 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 RAB21Q9UL25 225 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 TRPC5Q9UL62 973 aaPredicted RBP8.26□□□□□ -1.09
LSM1-202ENST00000520286 PCDHA10Q9Y5I2 948 aa8.26□□□□□ -1.09
LSM1-202ENST00000520286 SPRY2O43597 315 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms