RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 KATNAL2Q8IYT4 538 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 RCOR2Q8IZ40 523 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 NIPA2Q8N8Q9 360 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 PCSK9Q8NBP7 692 aaKnown RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 SLC4A11Q8NBS3 891 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 TRPV1Q8NER1 839 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 EXD1Q8NHP7 514 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 IPO4Q8TEX9 1081 aaKnown RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 GRK7Q8WTQ7 553 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 CASKIN2Q8WXE0 1202 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 IFT81Q8WYA0 676 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 TFAP2BQ92481 460 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 SEC14L1Q92503 715 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 TRIB2Q92519 343 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 MAGOHBQ96A72 148 aaKnown RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 C18orf8Q96DM3 657 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 RBM41Q96IZ5 413 aaKnown RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 HEXIM2Q96MH2 286 aaKnown RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 RUFY1Q96T51 708 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 EIF2AQ9BY44 585 aaKnown RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 ELOVL4Q9GZR5 314 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 SDCBP2Q9H190 292 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 SMYD3Q9H7B4 428 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 CHST12Q9NRB3 414 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 DDX56Q9NY93 547 aaKnown RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 PCYOX1Q9UHG3 505 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 AMACRQ9UHK6 382 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 FEZ2Q9UHY8 353 aaPredicted RBP6.16□□□□□ -1.42
CD47-205ENST00000517766 HPCAL4Q9UM19 191 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.16□□□□□ -1.42
CD47-205ENST00000517766 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
CD47-205ENST00000517766 PRAMEF27A3QJZ7 478 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 GOLGA6BA6NDN3 693 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 GOLGA8KD6RF30 607 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 M0QYV0 167 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 PIRO00625 290 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 TTI1O43156 1089 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 ADAMTS4O75173 837 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 RPS6KA5O75582 802 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 CABYRO75952 493 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 RECQL4O94761 1208 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 MYBL2P10244 700 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 KRT3P12035 628 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 CST5P28325 142 aaPredicted RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 LRPAP1P30533 357 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 COILP38432 576 aaPredicted RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 GPD2P43304 727 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 RAP1GAPP47736 663 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 GABRB2P47870 512 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 MARCKSL1P49006 195 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 CARSP49589 748 aaKnown RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 TAF6P49848 677 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 NDST1P52848 882 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 SP3Q02447 781 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 HLTFQ14527 1009 aaKnown RBP eCLIP6.15□□□□□ -1.42
CD47-205ENST00000517766 SV2CQ496J9 727 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 FBXO47Q5MNV8 452 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 UBXN11Q5T124 520 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 C9orf57Q5W0N0 161 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 TWF2Q6IBS0 349 aaKnown RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 CYP4F22Q6NT55 531 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 DENND1BQ6P3S1 775 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 CCDC137Q6PK04 289 aaKnown RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 LCLAT1Q6UWP7 414 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 POLNQ7Z5Q5 900 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 ZDHHC17Q8IUH5 632 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 GSPT2Q8IYD1 628 aaKnown RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 WDTC1Q8N5D0 677 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 KLHDC9Q8NEP7 349 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 TMEM40Q8WWA1 233 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 SLCO2A1Q92959 643 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 LENG1Q96BZ8 264 aaPredicted RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 TWNKQ96RR1 684 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 NCAPGQ9BPX3 1015 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 ERP44Q9BS26 406 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 NXF3Q9H4D5 531 aaKnown RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 LRRC19Q9H756 370 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 SYNCQ9H7C4 482 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 SLC38A7Q9NVC3 462 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 GDAP2Q9NXN4 497 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 CHORDC1Q9UHD1 332 aaPredicted RBP6.15□□□□□ -1.42
CD47-205ENST00000517766 NFU1Q9UMS0 254 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 GABRQQ9UN88 632 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 SNX9Q9Y5X1 595 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 CDY2AQ9Y6F7 541 aa6.15□□□□□ -1.42
CD47-205ENST00000517766 THSD7BQ9C0I4 1608 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 SMIM28A0A1B0GU29 152 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 FAM170AA1A519 330 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 KPNA7A9QM74 516 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 O00370 1275 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 NDC80O14777 642 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 CAND2O75155 1236 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 RNF8O76064 485 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 TOMM70O94826 608 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 TJP3O95049 919 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 ASGR1P07306 291 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 KRT7P08729 469 aa6.14□□□□□ -1.43
CD47-205ENST00000517766 PAX3P23760 479 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms