RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PKNOX2Q96KN3 472 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 C8orf48Q96LL4 319 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CSPG4P5Q96PW8 444 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 KCTD15Q96SI1 283 aaPredicted RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TMEM109Q9BVC6 243 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TRIM62Q9BVG3 475 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 OXCT2Q9BYC2 517 aaPredicted RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MRPL9Q9BYD2 267 aaKnown RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PPP1R12CQ9BZL4 782 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SEMA4AQ9H3S1 761 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DHX35Q9H5Z1 703 aaKnown RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CWH43Q9H720 699 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TMBIM4Q9HC24 238 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PIGVQ9NUD9 493 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TMEM51Q9NW97 253 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CWC15Q9P013 229 aaKnown RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 HCSTQ9UBK5 93 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ANAPC5Q9UJX4 755 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TPX2Q9ULW0 747 aaKnown RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 AP4E1Q9UPM8 1137 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SCML2Q9UQR0 700 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PLAAQ9Y263 795 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ATP8A1Q9Y2Q0 1164 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PRG3Q9Y2Y8 225 aaPredicted RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FARP1Q9Y4F1 1045 aaPredicted RBP5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MYO7AQ13402 2215 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DENND4CQ5VZ89 1909 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CHD5Q8TDI0 1954 aa5.64□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PDE4DIPQ5VU43 2346 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ABHD14A-ACY1A0A1B0GW23 586 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CFAP69A5D8W1 941 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 H7C4K7 107 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SMAPO00193 183 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DNALI1O14645 258 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NDC80O14777 642 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CAPN9O14815 690 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TRIM66O15016 1216 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 KIAA0355O15063 1070 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MCF2LO15068 1137 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DCLK1O15075 740 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 POLR3GO15318 223 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RIPK2O43353 540 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DGKIO75912 1065 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TTC4O95801 387 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TIMP1P01033 207 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 AMHP03971 560 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CLTBP09497 229 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RBP3P10745 1247 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GOT1P17174 413 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 AMPD1P23109 780 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ITGB8P26012 769 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RPL22P35268 128 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CHKAP35790 457 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GRIK1P39086 918 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 VPS41P49754 854 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PGFP49763 221 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SLC5A3P53794 718 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GDF10P55107 478 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 EIF3BP55884 814 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 BCAR1P56945 870 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FAM193AP78312 1265 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GABPB1Q06547 395 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SMARCB1Q12824 385 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GPS1Q13098 491 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GPR17Q13304 367 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DPYSQ14117 519 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SLC29A2Q14542 456 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PAFAH1B3Q15102 231 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LRRC26Q2I0M4 334 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 P3H1Q32P28 736 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CTXN3Q4LDR2 81 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TTMPQ5BVD1 217 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PPP6R3Q5H9R7 873 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ARTNQ5T4W7 220 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RNASEH2BQ5TBB1 312 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 IZUMO3Q5VZ72 239 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NCBP2-AS2Q69YL0 99 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FUT10Q6P4F1 479 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DARS2Q6PI48 645 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 C1orf228Q6PIY5 440 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RSPO2Q6UXX9 243 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CEP128Q6ZU80 1094 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TAS1R1Q7RTX1 841 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DEFB128Q7Z7B8 93 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PCGF5Q86SE9 256 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SCD5Q86SK9 330 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MON1AQ86VX9 555 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TMEM173Q86WV6 379 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FAM131BQ86XD5 332 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NUP93Q8N1F7 819 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PYROXD2Q8N2H3 581 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LRRC43Q8N309 656 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FAM71DQ8N9W8 422 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ATAD1Q8NBU5 361 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RNF139Q8WU17 664 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 BCL7CQ8WUZ0 217 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 UBLCP1Q8WVY7 318 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RSAD2Q8WXG1 361 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CPT1BQ92523 772 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms