RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 DEF8Q6ZN54 512 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 CCDC28AQ8IWP9 274 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 PNPLA1Q8N8W4 532 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 RFKQ969G6 155 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 LRRC37BQ96QE4 947 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 TWNKQ96RR1 684 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 RTKNQ9BST9 563 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 IMPG2Q9BZV3 1241 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 MS4A7Q9GZW8 240 aaPredicted RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 ARMT1Q9H993 441 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 NDUFAF4Q9P032 175 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 LRRFIP2Q9Y608 721 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 KIF27Q86VH2 1401 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 FYCO1Q9BQS8 1478 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 LAMA2P24043 3122 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 CD6P30203 668 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 COL10A1Q03692 680 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 MAPRE1Q15691 268 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 AASDHQ4L235 1098 aaPredicted RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 ALFQ53S48 1182 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 FAXCQ5TGI0 409 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 TSHZ3Q63HK5 1081 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 DENND2CQ68D51 928 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 SLC15A4Q8N697 577 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 CPEB3Q8NE35 698 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 TBC1D20Q96BZ9 403 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 EDC3Q96F86 508 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 PABPC3Q9H361 631 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 DLL3Q9NYJ7 618 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 LRFN1Q9P244 771 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 STEAP1Q9UHE8 339 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 CD207Q9UJ71 328 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 EPN1Q9Y6I3 576 aaPredicted RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 TNRC6CQ9HCJ0 1690 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 ARHGEF5Q12774 1597 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 ARID4BQ4LE39 1312 aaPredicted RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 ERVK-7P63135 1459 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 A0A0B4J269 797 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 NCAM2O15394 837 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 TPH1P17752 444 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 MATN1P21941 496 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 DDX6P26196 483 aaKnown RBP eCLIP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 PSMC1P62191 440 aaKnown RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 MC2RQ01718 297 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 TUBB3Q13509 450 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 FAM110CQ1W6H9 321 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 LY6G5CQ5SRR4 150 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 NFRKBQ6P4R8 1299 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 IZUMO1Q8IYV9 350 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 RNF169Q8NCN4 708 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 ATRIPQ8WXE1 791 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 HAS1Q92839 578 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 KTI12Q96EK9 354 aaPredicted RBP1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 GTF2A1LQ9UNN4 478 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 SNX13Q9Y5W8 968 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 WDFY3Q8IZQ1 3526 aa1.97□□□□□ -2.09
AC025539.1-201ENST00000515343 CDC42BPAQ5VT25 1732 aa1.96□□□□□ -2.09
AC025539.1-201ENST00000515343 MAST1Q9Y2H9 1570 aa1.96□□□□□ -2.09
AC025539.1-201ENST00000515343 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 TMEM233B4DJY2 109 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 M0QYG6 137 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 SPRY2O43597 315 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 SPDEFO95238 335 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 ADRA1DP25100 572 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 GKP32189 559 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 KCNJ5P48544 419 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 STARD3Q14849 445 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 C10orf62Q5T681 223 aaPredicted RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 RAP1GAP2Q684P5 730 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 LIN54Q6MZP7 749 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 MSANTD2Q6P1R3 559 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 FOXR2Q6PJQ5 311 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 RAB11FIP2Q7L804 512 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 MOGAT3Q86VF5 341 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 SNRNP27Q8WVK2 155 aaKnown RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 ATG4AQ8WYN0 398 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 WDYHV1Q96HA8 205 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 TEX101Q9BY14 249 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 INO80BQ9C086 356 aaPredicted RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 DCHS1Q96JQ0 3298 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 NUP153P49790 1475 aaKnown RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 NCANO14594 1321 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 VIRMAQ69YN4 1812 aaKnown RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 EHBP1L1Q8N3D4 1523 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 PMPCBO75439 489 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 ADRB1P08588 477 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 AVPR1BP47901 424 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 PTDSS1P48651 473 aaKnown RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 RARRES1P49788 294 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 RAP2BP61225 183 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 AP2B1P63010 937 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 RESTQ13127 1097 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 BMPR2Q13873 1038 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 SPDYE7PQ495Y7 208 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 SOWAHCQ53LP3 525 aaPredicted RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 AARS2Q5JTZ9 985 aaKnown RBP1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 MAP3K21Q5TCX8 1036 aa1.96□□□□□ -2.1
AC025539.1-201ENST00000515343 ACSM6Q6P461 480 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms