RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 F9P00740 461 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 AVPR1AP37288 418 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 ARHGAP25P42331 645 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 SULT1E1P49888 294 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 ZNF252P-AS1Q0IIN9 211 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 PIGHQ14442 188 aaPredicted RBP21.88■■□□□ 1.09
LSM6-207ENST00000515311 ACAP1Q15027 740 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 OTUD1Q5VV17 481 aaPredicted RBP21.88■■□□□ 1.09
LSM6-207ENST00000515311 STRADAQ7RTN6 431 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 ATRIPQ8WXE1 791 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 ZSWIM3Q96MP5 696 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 CYP2S1Q96SQ9 504 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 TBCBQ99426 244 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 FAM204AQ9H8W3 233 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 RASAL2Q9UJF2 1139 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 ARHGAP26Q9UNA1 814 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 FAM50BQ9Y247 325 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 USTQ9Y2C2 406 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 HBS1LQ9Y450 684 aaKnown RBP21.88■■□□□ 1.09
LSM6-207ENST00000515311 DUSP10Q9Y6W6 482 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 PRUNE2Q8WUY3 3088 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 M0QYT0 321 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 MDM4O15151 490 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 IRAK2O43187 625 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 MBL2P11226 248 aaPredicted RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 PSMA2P25787 234 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 GBP1P32455 592 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 NOP2P46087 812 aaKnown RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 PITX1P78337 314 aaPredicted RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 COG7P83436 770 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 EIF4EBP2Q13542 120 aaPredicted RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 SMAD2Q15796 467 aaKnown RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 IFI16Q16666 785 aaKnown RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 OTOP3Q7RTS5 596 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 MIB1Q86YT6 1006 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 RNF10Q8N5U6 811 aaKnown RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 ZFRQ96KR1 1074 aaKnown RBP21.87■■□□□ 1.09
LSM6-207ENST00000515311 NCAPGQ9BPX3 1015 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 DDIT4Q9NX09 232 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 TRIM10Q9UDY6 481 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 SALL4Q9UJQ4 1053 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 TLR6Q9Y2C9 796 aa21.87■■□□□ 1.09
LSM6-207ENST00000515311 CCP110O43303 1012 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 IGLV3-27P01718 113 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 TFE3P19532 575 aaPredicted RBP21.86■■□□□ 1.09
LSM6-207ENST00000515311 MAN1A1P33908 653 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 RDXP35241 583 aaKnown RBP21.86■■□□□ 1.09
LSM6-207ENST00000515311 ATP11AP98196 1134 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 RING1Q06587 406 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 TRIP4Q15650 581 aaPredicted RBP21.86■■□□□ 1.09
LSM6-207ENST00000515311 C15orf59Q2T9L4 293 aaPredicted RBP21.86■■□□□ 1.09
LSM6-207ENST00000515311 ARHGAP29Q52LW3 1261 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 POTEHQ6S545 545 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 ZSCAN18Q8TBC5 510 aaPredicted RBP21.86■■□□□ 1.09
LSM6-207ENST00000515311 ADAM32Q8TC27 787 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 FAM172AQ8WUF8 416 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 SMARCD2Q92925 531 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 ASB16Q96NS5 453 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 MYADMQ96S97 322 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 KLF16Q9BXK1 252 aaPredicted RBP21.86■■□□□ 1.09
LSM6-207ENST00000515311 ADAM33Q9BZ11 813 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 TRPV4Q9HBA0 871 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 TDP1Q9NUW8 608 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 SFMBT1Q9UHJ3 866 aa21.86■■□□□ 1.09
LSM6-207ENST00000515311 MSI1O43347 362 aaKnown RBP21.85■■□□□ 1.09
LSM6-207ENST00000515311 PROSCO94903 275 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 TCF3P15923 654 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 DEUP1Q05D60 604 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 PTCRAQ6ISU1 281 aaPredicted RBP21.85■■□□□ 1.09
LSM6-207ENST00000515311 SND1Q7KZF4 910 aaKnown RBP eCLIP21.85■■□□□ 1.09
LSM6-207ENST00000515311 DDX42Q86XP3 938 aaKnown RBP eCLIP21.85■■□□□ 1.09
LSM6-207ENST00000515311 ARID3BQ8IVW6 561 aaPredicted RBP21.85■■□□□ 1.09
LSM6-207ENST00000515311 TPCN2Q8NHX9 752 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 USP13Q92995 863 aaPredicted RBP21.85■■□□□ 1.09
LSM6-207ENST00000515311 PLD4Q96BZ4 506 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 BTBD6Q96KE9 485 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 KIF9Q9HAQ2 790 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 LZTFL1Q9NQ48 299 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 KCND1Q9NSA2 647 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 CALCOCO1Q9P1Z2 691 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 PAXBP1Q9Y5B6 917 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 CPQQ9Y646 472 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 C5orf42Q9H799 3197 aa21.85■■□□□ 1.09
LSM6-207ENST00000515311 SLC12A8A0AV02 714 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 MACROD2A1Z1Q3 448 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 GOLGA6L9A6NEM1 432 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 RNF8O76064 485 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 PRAMEF12O95522 483 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 SLC2A3P11169 496 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 LAMP2P13473 410 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 GBP2P32456 591 aaPredicted RBP21.84■■□□□ 1.09
LSM6-207ENST00000515311 CXCR3P49682 368 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 HDAC4P56524 1084 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 TBX4P57082 545 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 NME3Q13232 169 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 PPP2R5DQ14738 602 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 CDO1Q16878 200 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 FAM78AQ5JUQ0 283 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 C11orf63Q6NUN7 778 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms