RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 REPS2Q8NFH8 660 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 VPS50Q96JG6 964 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 DLGAP2Q9P1A6 1054 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 HAO1Q9UJM8 370 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 RCCD1A6NED2 376 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 PRR23D1E9PI22 279 aaPredicted RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 PLA2G6O60733 806 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 UBOX5O94941 541 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 PRR23D2P0DMB1 279 aaPredicted RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 TFDP3Q5H9I0 405 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 MARC1Q5VT66 337 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 ILDR2Q71H61 639 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 SLC44A2Q8IWA5 706 aaPredicted RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 FBXO25Q8TCJ0 367 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 CBWD1Q9BRT8 395 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 CISHQ9NSE2 258 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 AHSPQ9NZD4 102 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 COPG1Q9Y678 874 aaKnown RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 GNG14A0A1W2PPG7 69 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 RBAK-RBAKDNI3L0D1 243 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 FOXN3O00409 490 aaPredicted RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 DEAF1O75398 565 aaPredicted RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 PSEN2P49810 448 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 UBE3AQ05086 875 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 CHI3L2Q15782 390 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 ADCK1Q86TW2 530 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 ACTRT1Q8TDG2 376 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 RAMP2O60895 175 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 YWHAQP27348 245 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 SERPINB8P50452 374 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 SKP1P63208 163 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 DYNC1I2Q13409 638 aaKnown RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 LY6KQ17RY6 165 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 IQSEC1Q6DN90 963 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 CYGBQ8WWM9 190 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 TMCC3Q9ULS5 477 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 TRPV2Q9Y5S1 764 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 FGFR1P11362 822 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 ZNF844Q08AG5 666 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 OVGP1Q12889 678 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 LAYNQ6UX15 382 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 SUGP1Q8IWZ8 645 aaKnown RBP16.47■□□□□ 0.23
TRIM41-207ENST00000515223 AHCYL2Q96HN2 611 aaKnown RBP16.47■□□□□ 0.23
TRIM41-207ENST00000515223 RAD54BQ9Y620 910 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 CXCL8P10145 99 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 MAPK9P45984 424 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 MYL6P60660 151 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 TRMT11Q7Z4G4 463 aaKnown RBP16.47■□□□□ 0.23
TRIM41-207ENST00000515223 ZNF410Q86VK4 478 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 FICDQ9BVA6 458 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 DCLK3Q9C098 648 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 DCDC2Q9UHG0 476 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 F8VZ95 297 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 SGPL1O95470 568 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 KCNMA1Q12791 1236 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 PPIL2Q13356 520 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 ZSWIM1Q9BR11 485 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 ASCC2Q9H1I8 757 aaPredicted RBP16.47■□□□□ 0.23
TRIM41-207ENST00000515223 MANSC1Q9H8J5 431 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 IFNA14P01570 189 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 CYP11B1P15538 503 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 GTF2E2P29084 291 aaKnown RBP16.47■□□□□ 0.23
TRIM41-207ENST00000515223 RRM2P31350 389 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 TMEM159Q96B96 161 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 ATP13A1Q9HD20 1204 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 SMPD4Q9NXE4 827 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 RAB23Q9ULC3 237 aa16.47■□□□□ 0.23
TRIM41-207ENST00000515223 RBP1P09455 135 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 HALP42357 657 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 PABPC1LQ4VXU2 614 aaKnown RBP16.46■□□□□ 0.23
TRIM41-207ENST00000515223 HLA-DQA1Q5Y7H0 255 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 CASP10Q92851 521 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 SERPINB11Q96P15 392 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 ARMC7Q9H6L4 198 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 MAP10Q9P2G4 905 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 NCF1BA6NI72 391 aaPredicted RBP16.46■□□□□ 0.23
TRIM41-207ENST00000515223 NCF1CA8MVU1 366 aaPredicted RBP16.46■□□□□ 0.23
TRIM41-207ENST00000515223 NCF1P14598 390 aaPredicted RBP16.46■□□□□ 0.23
TRIM41-207ENST00000515223 PGM5Q15124 567 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 SMARCD1Q96GM5 515 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 ELOVL6Q9H5J4 265 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 GDF3Q9NR23 364 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 KRT84Q9NSB2 600 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 CYP39A1Q9NYL5 469 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 ATP5BP06576 529 aaKnown RBP16.46■□□□□ 0.23
TRIM41-207ENST00000515223 TCN1P20061 433 aaPredicted RBP16.46■□□□□ 0.23
TRIM41-207ENST00000515223 ZNF544Q6NX49 715 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 KAT2BQ92831 832 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 CDCA5Q96FF9 252 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 THTPAQ9BU02 230 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 ASB7Q9H672 318 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 USE1Q9NZ43 259 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 BARX2Q9UMQ3 279 aaPredicted RBP16.46■□□□□ 0.23
TRIM41-207ENST00000515223 USP18Q9UMW8 372 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 SPTLC1O15269 473 aa16.46■□□□□ 0.23
TRIM41-207ENST00000515223 PCNAP12004 261 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms