RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 SLC2A14Q8TDB8 520 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 TFB1MQ8WVM0 346 aaKnown RBP15.39■□□□□ 0.05
NUP54-217ENST00000514987 CFAP36Q96G28 342 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 RMDN2Q96LZ7 410 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 ARHGEF3Q9NR81 526 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 GRID1Q9ULK0 1009 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 STAP1Q9ULZ2 295 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 TTLL3Q9Y4R7 772 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 SPTLC1O15269 473 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 KRT38O76015 456 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 IL1BP01584 269 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 APOEP02649 317 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 MYL3P08590 195 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 DHRS4L1P0CG22 281 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 LMO2P25791 158 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 CNTFP26441 200 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 NOS2P35228 1153 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 RASSF2P50749 326 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 NEK3P51956 506 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 AIF1P55008 147 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 LILRA4P59901 499 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 OLFML2BQ68BL8 750 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 KCNT2Q6UVM3 1135 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 ASRGL1Q7L266 308 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 TBC1D1Q86TI0 1168 aaPredicted RBP15.38■□□□□ 0.05
NUP54-217ENST00000514987 CCNJLQ8IV13 435 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 KCTD15Q96SI1 283 aaPredicted RBP15.38■□□□□ 0.05
NUP54-217ENST00000514987 EBNA1BP2Q99848 306 aaKnown RBP15.38■□□□□ 0.05
NUP54-217ENST00000514987 PTPN18Q99952 460 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 MANSC1Q9H8J5 431 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 SLC38A7Q9NVC3 462 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 MKS1Q9NXB0 559 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 MTMR10Q9NXD2 777 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 KLK14Q9P0G3 267 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 FZD10Q9ULW2 581 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 IPPQ9Y573 584 aa15.38■□□□□ 0.05
NUP54-217ENST00000514987 C2CD2LO14523 706 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 TREHO43280 583 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 DGKIO75912 1065 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 FBXO21O94952 628 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 UNC5CO95185 931 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 TGDSO95455 350 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 ATP6V1G2O95670 118 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 NPR3P17342 541 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 ADRA1DP25100 572 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 HOXC8P31273 242 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 SULT1E1P49888 294 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 NRLP54845 237 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 GBE1Q04446 702 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 MGAT5Q09328 741 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 FAAP100Q0VG06 881 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 TAF2Q6P1X5 1199 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 OTOAQ7RTW8 1153 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 GSDMBQ8TAX9 411 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 CCDC110Q8TBZ0 833 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 CLEC4CQ8WTT0 213 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 C10orf82Q8WW14 230 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 HTR3CQ8WXA8 447 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 IQCGQ9H095 443 aaKnown RBP15.37■□□□□ 0.05
NUP54-217ENST00000514987 SLCO1B3Q9NPD5 702 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 EIF2B3Q9NR50 452 aaKnown RBP15.37■□□□□ 0.05
NUP54-217ENST00000514987 RAD54BQ9Y620 910 aa15.37■□□□□ 0.05
NUP54-217ENST00000514987 A0A0A0MRY4 1105 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 COPEO14579 308 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 KLF11O14901 512 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 PTPN1P18031 435 aaKnown RBP15.36■□□□□ 0.05
NUP54-217ENST00000514987 TFE3P19532 575 aaPredicted RBP15.36■□□□□ 0.05
NUP54-217ENST00000514987 MRPS5P82675 430 aaKnown RBP15.36■□□□□ 0.05
NUP54-217ENST00000514987 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 NCBP2-AS2Q69YL0 99 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 SH2D5Q6ZV89 423 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 PDZD4Q76G19 769 aaPredicted RBP15.36■□□□□ 0.05
NUP54-217ENST00000514987 PIGZQ86VD9 579 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 CTAGE3PQ8IX95 158 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 DEFB106AQ8N104 65 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 TMEM86AQ8N2M4 240 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 ZNF276Q8N554 614 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 PPM1NQ8N819 430 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 TMEM40Q8WWA1 233 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 INPP5DQ92835 1189 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 NT5C3BQ969T7 300 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 SPATA13Q96N96 652 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 OLFM3Q96PB7 478 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 SLC9A7Q96T83 725 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 LPIN3Q9BQK8 851 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 NAT9Q9BTE0 207 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 TUBB6Q9BUF5 446 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 LRRC4Q9HBW1 653 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 DTLQ9NZJ0 730 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 GGT7Q9UJ14 662 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 USP3Q9Y6I4 520 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 M0QZ92 97 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
NUP54-217ENST00000514987 CYB561D2O14569 222 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 GABRDO14764 452 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 OPHN1O60890 802 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 AVILO75366 819 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 METTL18O95568 372 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 C1QAP02745 245 aa15.36■□□□□ 0.05
NUP54-217ENST00000514987 RPLP2P05387 115 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms