RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ARHGEF19Q8IW93 802 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 C4orf32Q8N8J7 132 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 GSTCDQ8NEC7 633 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 PIWIL2Q8TC59 973 aaKnown RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 SIK2Q9H0K1 926 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 IL1RL2Q9HB29 575 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 PRDM5Q9NQX1 630 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 PRMT7Q9NVM4 692 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 PIK3C2AO00443 1686 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 IGSF9BQ9UPX0 1349 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 NFIBO00712 420 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 CLASP2O75122 1294 aaKnown RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ITGA2BP08514 1039 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 MYL4P12829 197 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 CCNB1P14635 433 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 PSMC6P62333 389 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 BST1Q10588 318 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 RNF219Q5W0B1 726 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 APOBEC3HQ6NTF7 200 aaKnown RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 CBWD2Q8IUF1 395 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 RFWD2Q8NHY2 731 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 GLIS2Q9BZE0 524 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 KIF17Q9P2E2 1029 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 HEATR9A2RTY3 570 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ASNA1O43681 348 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 SERPINA6P08185 405 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 TM4SF1P30408 202 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 MARSP56192 900 aaKnown RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 DGKDQ16760 1214 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ZNF618Q5T7W0 954 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 N4BP2L1Q5TBK1 243 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 LPCAT4Q643R3 524 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 NOP9Q86U38 636 aaKnown RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ZFPM1Q8IX07 1006 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 RNF148Q8N7C7 305 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 TARS2Q9BW92 718 aaKnown RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 CAB39Q9Y376 341 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 NFAT5O94916 1531 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 KANSL1LA0AUZ9 987 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 PHGDHO43175 533 aaKnown RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ZNF23P17027 643 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 CDH2P19022 906 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 TCF7P36402 384 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ATF7IP2Q5U623 682 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ZCCHC23Q6ZST2 131 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 ARL10Q8N8L6 244 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 TDRD5Q8NAT2 981 aaKnown RBP11.57□□□□□ -0.56
TCOF1-211ENST00000513346 BORCS5Q969J3 196 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 MAGED4Q96JG8 741 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 SH3GL1Q99961 368 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 HMG20AQ9NP66 347 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 RPTORQ8N122 1335 aa11.57□□□□□ -0.56
TCOF1-211ENST00000513346 A0A1W2PPM1 405 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 MAP3K13O43283 966 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 PEX1O43933 1283 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 ZSCAN5DPP0CG00 497 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 IMPDH2P12268 514 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 S100A1P23297 94 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CUL2Q13617 745 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 VEPH1Q14D04 833 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 NEDD8Q15843 81 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 TRIM60Q495X7 471 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 MFSD7Q6UXD7 560 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 ALYREFQ86V81 257 aaKnown RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 SNX32Q86XE0 403 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CCDC60Q8IWA6 550 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 FSD1LQ9BXM9 530 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 MAP3K20Q9NYL2 800 aaKnown RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 LGALS13Q9UHV8 139 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 DYTNA2CJ06 578 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 SERPINI2O75830 405 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CREB1P16220 341 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 NRF1Q16656 503 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 ACSBG2Q5FVE4 666 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 KATNAL2Q8IYT4 538 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 OR9Q1Q8NGQ5 310 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CYP2W1Q8TAV3 490 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CALML6Q8TD86 181 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 GANCQ8TET4 914 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 PDCD6IPQ8WUM4 868 aaKnown RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 GLMNQ92990 594 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 AGAP3Q96P47 875 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 NSMCE4AQ9NXX6 385 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 H0YGN5 161 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 DPYSL4O14531 572 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 LCP1P13796 627 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CCNFP41002 786 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 RHBDL3P58872 404 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 NR1D2Q14995 579 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 SLC1A5Q15758 541 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 ASTE1Q2TB18 679 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms