RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 PIK3CAP42336 1068 aa8.79□□□□□ -1
SDHC-208ENST00000513009 PRCPP42785 496 aa8.79□□□□□ -1
SDHC-208ENST00000513009 PDE6CP51160 858 aa8.79□□□□□ -1
SDHC-208ENST00000513009 SEMA3BQ13214 749 aa8.79□□□□□ -1
SDHC-208ENST00000513009 NCOA4Q13772 614 aa8.79□□□□□ -1
SDHC-208ENST00000513009 GAB4Q2WGN9 574 aa8.79□□□□□ -1
SDHC-208ENST00000513009 CFAP221Q4G0U5 840 aa8.79□□□□□ -1
SDHC-208ENST00000513009 CCDC40Q4G0X9 1142 aa8.79□□□□□ -1
SDHC-208ENST00000513009 HSF5Q4G112 596 aaPredicted RBP8.79□□□□□ -1
SDHC-208ENST00000513009 COBLL1Q53SF7 1204 aa8.79□□□□□ -1
SDHC-208ENST00000513009 C2orf27AQ580R0 203 aa8.79□□□□□ -1
SDHC-208ENST00000513009 PEAR1Q5VY43 1037 aaPredicted RBP8.79□□□□□ -1
SDHC-208ENST00000513009 ISM2Q6H9L7 571 aa8.79□□□□□ -1
SDHC-208ENST00000513009 SLC23A3Q6PIS1 610 aa8.79□□□□□ -1
SDHC-208ENST00000513009 LPCAT2Q7L5N7 544 aa8.79□□□□□ -1
SDHC-208ENST00000513009 CREBRFQ8IUR6 639 aa8.79□□□□□ -1
SDHC-208ENST00000513009 SYT12Q8IV01 421 aa8.79□□□□□ -1
SDHC-208ENST00000513009 PDCL2Q8N4E4 241 aa8.79□□□□□ -1
SDHC-208ENST00000513009 TTC39CQ8N584 583 aa8.79□□□□□ -1
SDHC-208ENST00000513009 TRIML1Q8N9V2 468 aa8.79□□□□□ -1
SDHC-208ENST00000513009 STKLD1Q8NE28 680 aa8.79□□□□□ -1
SDHC-208ENST00000513009 ZSWIM2Q8NEG5 633 aa8.79□□□□□ -1
SDHC-208ENST00000513009 OR5B17Q8NGF7 314 aa8.79□□□□□ -1
SDHC-208ENST00000513009 SH3RF2Q8TEC5 729 aa8.79□□□□□ -1
SDHC-208ENST00000513009 CYP2S1Q96SQ9 504 aa8.79□□□□□ -1
SDHC-208ENST00000513009 PKMYT1Q99640 499 aa8.79□□□□□ -1
SDHC-208ENST00000513009 MMRN2Q9H8L6 949 aa8.79□□□□□ -1
SDHC-208ENST00000513009 TRPC7Q9HCX4 862 aa8.79□□□□□ -1
SDHC-208ENST00000513009 PRM3Q9NNZ6 103 aa8.79□□□□□ -1
SDHC-208ENST00000513009 DMAC2Q9NW81 257 aa8.79□□□□□ -1
SDHC-208ENST00000513009 KLK13Q9UKR3 277 aa8.79□□□□□ -1
SDHC-208ENST00000513009 ARHGAP26Q9UNA1 814 aa8.79□□□□□ -1
SDHC-208ENST00000513009 PCDH15Q96QU1 1955 aa8.79□□□□□ -1
SDHC-208ENST00000513009 ADAMTS9Q9P2N4 1935 aa8.78□□□□□ -1
SDHC-208ENST00000513009 A0A0A0MRY4 1105 aa8.78□□□□□ -1
SDHC-208ENST00000513009 H0Y626 953 aa8.78□□□□□ -1
SDHC-208ENST00000513009 SLC16A3O15427 465 aaKnown RBP8.78□□□□□ -1
SDHC-208ENST00000513009 TACC1O75410 805 aa8.78□□□□□ -1
SDHC-208ENST00000513009 TRIM16O95361 564 aa8.78□□□□□ -1
SDHC-208ENST00000513009 STAU1O95793 577 aaKnown RBP8.78□□□□□ -1
SDHC-208ENST00000513009 CST3P01034 146 aaPredicted RBP8.78□□□□□ -1
SDHC-208ENST00000513009 CAPNS1P04632 268 aa8.78□□□□□ -1
SDHC-208ENST00000513009 PDGFRBP09619 1106 aa8.78□□□□□ -1
SDHC-208ENST00000513009 ENGP17813 658 aa8.78□□□□□ -1
SDHC-208ENST00000513009 WARSP23381 471 aaKnown RBP8.78□□□□□ -1
SDHC-208ENST00000513009 CYP2F1P24903 491 aa8.78□□□□□ -1
SDHC-208ENST00000513009 RDXP35241 583 aaKnown RBP8.78□□□□□ -1
SDHC-208ENST00000513009 GRIK1P39086 918 aa8.78□□□□□ -1
SDHC-208ENST00000513009 EIF2DP41214 584 aaKnown RBP8.78□□□□□ -1
SDHC-208ENST00000513009 MYL6P60660 151 aa8.78□□□□□ -1
SDHC-208ENST00000513009 YWHAEP62258 255 aaKnown RBP8.78□□□□□ -1
SDHC-208ENST00000513009 CYP27A1Q02318 531 aa8.78□□□□□ -1
SDHC-208ENST00000513009 VAC14Q08AM6 782 aa8.78□□□□□ -1
SDHC-208ENST00000513009 BYSLQ13895 437 aaKnown RBP8.78□□□□□ -1
SDHC-208ENST00000513009 DDR2Q16832 855 aa8.78□□□□□ -1
SDHC-208ENST00000513009 DCAF17Q5H9S7 520 aaPredicted RBP8.78□□□□□ -1
SDHC-208ENST00000513009 SDHAF4Q5VUM1 108 aa8.78□□□□□ -1
SDHC-208ENST00000513009 KRT39Q6A163 491 aa8.78□□□□□ -1
SDHC-208ENST00000513009 KLHL10Q6JEL2 608 aa8.78□□□□□ -1
SDHC-208ENST00000513009 KIAA1211LQ6NV74 962 aa8.78□□□□□ -1
SDHC-208ENST00000513009 SV2AQ7L0J3 742 aa8.78□□□□□ -1
SDHC-208ENST00000513009 SCN4BQ8IWT1 228 aa8.78□□□□□ -1
SDHC-208ENST00000513009 CCDC33Q8N5R6 958 aa8.78□□□□□ -1
SDHC-208ENST00000513009 ARL14EPQ8N8R7 260 aaPredicted RBP8.78□□□□□ -1
SDHC-208ENST00000513009 WHAMMQ8TF30 809 aa8.78□□□□□ -1
SDHC-208ENST00000513009 FUBP3Q96I24 572 aaKnown RBP eCLIP8.78□□□□□ -1
SDHC-208ENST00000513009 SPACA7Q96KW9 195 aa8.78□□□□□ -1
SDHC-208ENST00000513009 CEP295NLQ96MC4 621 aa8.78□□□□□ -1
SDHC-208ENST00000513009 MED10Q9BTT4 135 aa8.78□□□□□ -1
SDHC-208ENST00000513009 LINC00597Q9H2U6 94 aa8.78□□□□□ -1
SDHC-208ENST00000513009 TMEM8AQ9HCN3 771 aa8.78□□□□□ -1
SDHC-208ENST00000513009 TMEM74BQ9NUR3 256 aa8.78□□□□□ -1
SDHC-208ENST00000513009 ARMCX3Q9UH62 379 aaPredicted RBP8.78□□□□□ -1
SDHC-208ENST00000513009 L1RE1Q9UN81 338 aa8.78□□□□□ -1
SDHC-208ENST00000513009 CACNA1EQ15878 2313 aa8.77□□□□□ -1
SDHC-208ENST00000513009 SPAARA0A1B0GVQ0 90 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 C2orf78A6NCI8 922 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 LRRIQ3A6PVS8 624 aaPredicted RBP8.77□□□□□ -1.01
SDHC-208ENST00000513009 BIN1O00499 593 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 GADD45BO75293 160 aaPredicted RBP8.77□□□□□ -1.01
SDHC-208ENST00000513009 C4BPAP04003 597 aaKnown RBP8.77□□□□□ -1.01
SDHC-208ENST00000513009 CYP17A1P05093 508 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 TPM2P07951 284 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 HNRNPLP14866 589 aaKnown RBP eCLIP8.77□□□□□ -1.01
SDHC-208ENST00000513009 HDCP19113 662 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 PTGER3P43115 390 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 MAGEA11P43364 429 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 MAPK8P45983 427 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 CASP4P49662 377 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 SEC13P55735 322 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 SLC8A3P57103 927 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 SIM1P81133 766 aaPredicted RBP8.77□□□□□ -1.01
SDHC-208ENST00000513009 ZXDBP98169 803 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 POU4F2Q12837 409 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 PAK1Q13153 545 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 HNRNPDQ14103 355 aaKnown RBP8.77□□□□□ -1.01
SDHC-208ENST00000513009 CAMK4Q16566 473 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 SOWAHAQ2M3V2 549 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 MAP7D1Q3KQU3 841 aa8.77□□□□□ -1.01
SDHC-208ENST00000513009 EOGTQ5NDL2 527 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms