RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ZNF81P51508 661 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RPP30P78346 268 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 IRX1P78414 480 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 TRIM32Q13049 653 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 PRICKLE4Q2TBC4 344 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 TMTC4Q5T4D3 741 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 SYT13Q7L8C5 426 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RAB44Q7Z6P3 723 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 CCDC117Q8IWD4 279 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 PHC2Q8IXK0 858 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 POU5F2Q8N7G0 328 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 KIF18AQ8NI77 898 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 URGCPQ8TCY9 931 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZDHHC12Q96GR4 267 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 ATP6V1G3Q96LB4 118 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZIC5Q96T25 663 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 KCNJ15Q99712 375 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 SIKE1Q9BRV8 207 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 TWSG1Q9GZX9 223 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RNF32Q9H0A6 362 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 ABCG8Q9H221 673 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 TJP2Q9UDY2 1190 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 INTS6Q9UL03 887 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RNF112Q9ULX5 631 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 PLAGL2Q9UPG8 496 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 ADGRB3O60242 1522 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 SYNMO15061 1565 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 MROH2AA6NES4 1674 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 KIF1BO60333 1816 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RNF103-CHMP3A0A140T963 221 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 TCRBV5S4A2TA0A5A2 114 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 VWA3AA6NCI4 1184 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 RNF103O00237 685 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PSMA7O14818 248 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 SCAF4O95104 1147 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PNPP00491 289 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PRKCBP05771 671 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 GSTP1P09211 210 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTPN3P26045 913 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 LTKP29376 864 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTGER3P43115 390 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 HAAOP46952 286 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PMS2P54278 862 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 AMPD2Q01433 879 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 KRT17Q04695 432 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 MEP1BQ16820 701 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 UBAP2Q5T6F2 1119 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 DEPDC1Q5TB30 811 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 RAP1GAP2Q684P5 730 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 UNQ6494/PRO21346Q6UXR6 183 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 FRMD7Q6ZUT3 714 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 HFE2Q6ZVN8 426 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTCHD4Q6ZW05 846 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 HASPINQ8TF76 798 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 SCFD2Q8WU76 684 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 NCLNQ969V3 563 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 INTS14Q96SY0 518 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 BOCQ9BWV1 1114 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 WDR26Q9H7D7 661 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 NDFIP2Q9NV92 336 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 CYP39A1Q9NYL5 469 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 TLK1Q9UKI8 766 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 C15orf41Q9Y2V0 281 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PIK3C2BO00750 1634 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 XKRY2A2RUG3 117 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 C19orf67A6NJJ6 358 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 E2F3O00716 465 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF263O14978 683 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 BMP1P13497 986 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF3P17036 446 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 ALDH4A1P30038 563 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 CAPZA2P47755 286 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 CLCNKAP51800 687 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PDE1AP54750 535 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 RELBQ01201 579 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 TAP2Q03519 686 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 IKQ13123 557 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 NOGQ13253 232 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 CAPSQ13938 189 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 FGL2Q14314 439 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PFKFB3Q16875 520 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 UGT8Q16880 541 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 FBXO48Q5FWF7 155 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 TIGD7Q6NT04 549 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 MTERF4Q7Z6M4 381 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 SLC13A3Q8WWT9 602 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 KAT2AQ92830 837 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 WDFY2Q96P53 400 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 DMRTA2Q96SC8 542 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 PIP5K1AQ99755 562 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 UQCC2Q9BRT2 126 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF518BQ9C0D4 1074 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 STMN4Q9H169 189 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 RHBGQ9H310 441 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 EVA1AQ9H8M9 152 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 SARS2Q9NP81 518 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 SMPD3Q9NY59 655 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 AFF4Q9UHB7 1163 aaKnown RBP6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 HCN2Q9UL51 889 aa6.57□□□□□ -1.36
TRAPPC11-209ENST00000512476 MED16Q9Y2X0 877 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms