RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 VTNP04004 478 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FGRP09769 529 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ATP1A3P13637 1013 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 HSPA9P38646 679 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 TCEA2Q15560 299 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ZNHIT3Q15649 155 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 TTC39BQ5VTQ0 682 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 MAP1SQ66K74 1059 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 SHC4Q6S5L8 630 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 SH3BP5LQ7L8J4 393 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 NECAB2Q7Z6G3 386 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 PALB2Q86YC2 1186 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 MCEMP1Q8IX19 187 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CXorf40AQ8TE69 158 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 GPRASP2Q96D09 838 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CXorf40BQ96DE9 158 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 RIT2Q99578 217 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 PRKD2Q9BZL6 878 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 TMEM8AQ9HCN3 771 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 DCDC2Q9UHG0 476 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ZNF112Q9UJU3 913 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FBXO2Q9UK22 296 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 PAIP2BQ9ULR5 123 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 ENTPD4Q9Y227 616 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ZNF711Q9Y462 761 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 SMIM31A0A1B0GVY4 71 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 GMNCA6NCL1 334 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 TBX3O15119 743 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 MTRF1O75570 445 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 PAICSP22234 425 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 FMO5P49326 533 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 HNMTP50135 292 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CLCN3P51790 818 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 RAD23BP54727 409 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ITPK1Q13572 414 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 BOP1Q14137 746 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 PKN2Q16513 984 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 LRRC74BQ6ZQY2 392 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 PEG10Q86TG7 708 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 ACOT1Q86TX2 421 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FBXO16Q8IX29 292 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 UXS1Q8NBZ7 420 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 SOCS4Q8WXH5 440 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FBXO44Q9H4M3 255 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FANCEQ9HB96 536 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 NT5MQ9NPB1 228 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ANKEF1Q9NU02 776 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.94□□□□□ -1.46
USP38-203ENST00000511739 ADAM30Q9UKF2 790 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 LMO7Q8WWI1 1683 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FAM208AQ9UK61 1670 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 SMAPO00193 183 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ZBTB39O15060 712 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 NCAM2O15394 837 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 GUCY1B2O75343 617 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 USP1O94782 785 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FBXO21O94952 628 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 GLP2RO95838 553 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FDPSP14324 419 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 TLX1P31314 330 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 POLR2LP62875 67 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 PEX6Q13608 980 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ARMC4Q5T2S8 1044 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 OVOS1Q6IE37 1185 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 C3orf62Q6ZUJ4 267 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CBWD2Q8IUF1 395 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 KLHL23Q8NBE8 558 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 LPCAT1Q8NF37 534 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 RDM1Q8NG50 284 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CCDC126Q96EE4 140 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 TAAR1Q96RJ0 339 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 REEP2Q9BRK0 252 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 UBE2OQ9C0C9 1292 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 MTFR1LQ9H019 292 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CAAP1Q9H8G2 361 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ELOVL2Q9NXB9 296 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 MRPS23Q9Y3D9 190 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 RAD54BQ9Y620 910 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ZNF682O95780 498 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 OR56A5P0C7T3 313 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 AKR1A1P14550 325 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 VAV1P15498 845 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CCNG1P51959 295 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 NUP107P57740 925 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 MTA1Q13330 715 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 NFIL3Q16649 462 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 USP41Q3LFD5 358 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CCDC149Q6ZUS6 474 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 GALNT4Q8N4A0 578 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 MAGEC3Q8TD91 643 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 UBE2Q2Q8WVN8 375 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ASZ1Q8WWH4 475 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 SH3GL2Q99962 352 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 MRPL17Q9NRX2 175 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 LRRC4BQ9NT99 713 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 TRIM10Q9UDY6 481 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 ESYT3A0FGR9 886 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PDE2AO00408 941 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 ABCB1P08183 1280 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms