RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 ENTPD1P49961 510 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 PGDP52209 483 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 JAK3P52333 1124 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 DSCR9P59020 149 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 SLC4A8Q2Y0W8 1093 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 NUGGCQ68CJ6 796 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 TRAPPC11Q7Z392 1133 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 KCTD20Q7Z5Y7 419 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 MPP5Q8N3R9 675 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 LMO3Q8TAP4 145 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 PIGKQ92643 395 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 NUP88Q99567 741 aaPredicted RBP3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 SF3B5Q9BWJ5 86 aaKnown RBP3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 ASPSCR1Q9BZE9 553 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 ZNF518BQ9C0D4 1074 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 A1CFQ9NQ94 594 aaKnown RBP3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 STAP2Q9UGK3 403 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 RIMKLBQ9ULI2 386 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 THRAP3Q9Y2W1 955 aaKnown RBP3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 PAXBP1Q9Y5B6 917 aa3.41□□□□□ -1.86
SCAMP1-204ENST00000511551 LOC102723971A0A1B0GUV8 181 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 LINC01565O15544 149 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 HGFP14210 728 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 TXNL4AP83876 142 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 RTL10Q7L3V2 364 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 SKAP1Q86WV1 359 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 VPS50Q96JG6 964 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 PIMREGQ9BSJ6 248 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 RMI1Q9H9A7 625 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 MOV10Q9HCE1 1003 aaKnown RBP3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 TCF7L1Q9HCS4 588 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 THSD1Q9NS62 852 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 STEAP1Q9UHE8 339 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 ANAPC4Q9UJX5 808 aa3.4□□□□□ -1.87
SCAMP1-204ENST00000511551 KIR2DS5A0A0G2JLQ3 304 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 CLEC18AA5D8T8 446 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 KIR2DS3K7RE56 304 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 RRP9O43818 475 aaKnown RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 ALDH1L1O75891 902 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 ZNF432O94892 652 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 ACAA1P09110 424 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 VCAM1P19320 739 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 TFEBP19484 476 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 EN2P19622 333 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 IDUAP35475 653 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 KCNJ4P48050 445 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 WDR5P61964 334 aaKnown RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 MCL1Q07820 350 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 CCDC15Q0P6D6 951 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 DNASE1L3Q13609 305 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 FAM50AQ14320 339 aaKnown RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 PIK3CD-AS1Q5SR53 167 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 CACHD1Q5VU97 1274 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 SLC39A5Q6ZMH5 540 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 USP49Q70CQ1 688 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 TRILQ7L0X0 811 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 DENND1CQ8IV53 801 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 CLEC18CQ8NCF0 446 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 OR56A3Q8NH54 315 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 MAML1Q92585 1016 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 SPSB4Q96A44 273 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 PHF21BQ96EK2 531 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 CINPQ9BW66 212 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 DHX36Q9H2U1 1008 aaKnown RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 ZNF556Q9HAH1 456 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 PLSCR4Q9NRQ2 329 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 VPS45Q9NRW7 570 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 PLK2Q9NYY3 685 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 RGS17Q9UGC6 210 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 ICAM5Q9UMF0 924 aa3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 ZNF335Q9H4Z2 1342 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-204ENST00000511551 PHGDHO43175 533 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 UGDHO60701 494 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 PAPSS2O95340 614 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 PARNO95453 639 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 CGAP01215 116 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 GALNSP34059 522 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 RFX2P48378 723 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 PTDSS1P48651 473 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 MTA1Q13330 715 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 CLCA4Q14CN2 919 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 NFE2Q16621 373 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 INO80DQ53TQ3 878 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 SRGAP1Q7Z6B7 1085 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 GRAMD1CQ8IYS0 662 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 C11orf44Q8N8P7 122 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 ZNF668Q96K58 619 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 NCKIPSDQ9NZQ3 722 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 KLHL42Q9P2K6 505 aa3.38□□□□□ -1.87
SCAMP1-204ENST00000511551 A0A1B0GUV1 79 aa3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 A0A1W2PPL8 197 aa3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 MBD3L4A6NDZ8 208 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 MBD3L3A6NE82 208 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 H7C4K7 107 aa3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 CA12O43570 354 aa3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 AP1G1O43747 822 aa3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 HOXC6P09630 235 aa3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 TMIGD3P0DMS9 266 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-204ENST00000511551 ST6GAL1P15907 406 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms