RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TFE3P19532 575 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-209ENST00000511426 RAB33AQ14088 237 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 TMEM240Q5SV17 173 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 RNF19BQ6ZMZ0 732 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 C16orf59Q7L2K0 433 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 TAS1R1Q7RTX1 841 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 FAM131BQ86XD5 332 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 PDZD8Q8NEN9 1154 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 SCAMP5Q8TAC9 235 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 DQX1Q8TE96 717 aaKnown RBP15.8■□□□□ 0.12
SCLT1-209ENST00000511426 RNF139Q8WU17 664 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 NDRG1Q92597 394 aaKnown RBP15.8■□□□□ 0.12
SCLT1-209ENST00000511426 P3H4Q92791 437 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 CCDC114Q96M63 670 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 PGLYRP2Q96PD5 576 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 ADAM33Q9BZ11 813 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 ACBD3Q9H3P7 528 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 TLR8Q9NR97 1041 aaKnown RBP15.8■□□□□ 0.12
SCLT1-209ENST00000511426 PIGVQ9NUD9 493 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 WHRNQ9P202 907 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 R3HDM2Q9Y2K5 976 aaKnown RBP15.8■□□□□ 0.12
SCLT1-209ENST00000511426 WDR27A2RRH5 827 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 CFAP69A5D8W1 941 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 IRAK2O43187 625 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ZMYND10O75800 440 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 SLC2A3P11169 496 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ATF2P15336 505 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 IL4RP24394 825 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 STIP1P31948 543 aaKnown RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ADRA1BP35368 520 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 CARSP49589 748 aaKnown RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ARPP19P56211 112 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ADCY2Q08462 1091 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 HLTFQ14527 1009 aaKnown RBP eCLIP15.79■□□□□ 0.123e-6■■□□□ 14.5
SCLT1-209ENST00000511426 PPP2R5DQ14738 602 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 NOMO1Q15155 1222 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ZC3H12AQ5D1E8 599 aaKnown RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 SPDYCQ5MJ68 293 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 PRSS55Q6UWB4 352 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 RSPO2Q6UXX9 243 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 MREGQ8N565 214 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ACTL9Q8TC94 416 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ATG4AQ8WYN0 398 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 HAUS1Q96CS2 278 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 B3GALT6Q96L58 329 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 RAD9AQ99638 391 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 WDCPQ9H6R7 721 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 MRPL17Q9NRX2 175 aaKnown RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 MTMR10Q9NXD2 777 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 NEU2Q9Y3R4 380 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 RAD54BQ9Y620 910 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 PLXNA3P51805 1871 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 KIAA0100Q14667 2235 aaKnown RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ZSCAN5CA6NGD5 496 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 MAP2K7O14733 419 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ITIH2P19823 946 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 OR1D2P34982 312 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 OTUD4Q01804 1114 aaKnown RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 CALCOCO2Q13137 446 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 NME3Q13232 169 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 XRCC4Q13426 336 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 DDR2Q16832 855 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 CEP128Q6ZU80 1094 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 SCD5Q86SK9 330 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 TADA2BQ86TJ2 420 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ALLCQ8N6M5 410 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 CCDC185Q8N715 623 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 IFT81Q8WYA0 676 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 LRRC45Q96CN5 670 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 CSPG4P5Q96PW8 444 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 HAPLN3Q96S86 360 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 SEPT5Q99719 369 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 CLSTN3Q9BQT9 956 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 FUT8Q9BYC5 575 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 RXFP1Q9HBX9 757 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ZNF446Q9NWS9 450 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 MTRF1LQ9UGC7 380 aaKnown RBP15.79■□□□□ 0.12
SCLT1-209ENST00000511426 DNPEPQ9ULA0 475 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 NFU1Q9UMS0 254 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 ZNF148Q9UQR1 794 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 LZTS1Q9Y250 596 aa15.79■□□□□ 0.12
SCLT1-209ENST00000511426 DAPK3O43293 454 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 VNN2O95498 520 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 CSH1P0DML2 217 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 CSH2P0DML3 217 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 MYBL2P10244 700 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 CCR1P32246 355 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 KCNJ1P48048 391 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 KPNA1P52294 538 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-209ENST00000511426 ATXN1P54253 815 aaKnown RBP15.78■□□□□ 0.12
SCLT1-209ENST00000511426 DUSP4Q13115 394 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 LLGL1Q15334 1064 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 RAB6CQ53S08 254 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 PPP6R3Q5H9R7 873 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-209ENST00000511426 FAM117BQ6P1L5 589 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 TAC4Q86UU9 113 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 PLD5Q8N7P1 536 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 PCDH19Q8TAB3 1148 aa15.78■□□□□ 0.12
SCLT1-209ENST00000511426 FBXO32Q969P5 355 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms