RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 FAM204AQ9H8W3 233 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 TMEM51Q9NW97 253 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 RRN3Q9NYV6 651 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 SFMBT1Q9UHJ3 866 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 CA14Q9ULX7 337 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 NAALADL1Q9UQQ1 740 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 TLR6Q9Y2C9 796 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 MYOFQ9NZM1 2061 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 KMT2EQ8IZD2 1858 aa13.42□□□□□ -0.26
COL6A6-203ENST00000511332 FAM170AA1A519 330 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 MSI1O43347 362 aaKnown RBP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 GRAP2O75791 330 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 LATS1O95835 1130 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 HMBSP08397 361 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 CDC25BP30305 580 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 CORO1AP31146 461 aaKnown RBP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 GBP1P32455 592 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 NOS2P35228 1153 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 MATKP42679 507 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 HARS2P49590 506 aaKnown RBP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 MLLT6P55198 1093 aaPredicted RBP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 CDK17Q00537 523 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 AMPD2Q01433 879 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 RING1Q06587 406 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 TNK2Q07912 1038 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 PTP4A2Q12974 167 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 NR1H3Q13133 447 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 RUNX3Q13761 415 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 TAF5Q15542 800 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 EML3Q32P44 896 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 C2CD6Q53TS8 623 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 TRIM68Q6AZZ1 485 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 ARCQ7LC44 396 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 TAC4Q86UU9 113 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 DEFB106AQ8N104 65 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 SIX5Q8N196 739 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 C3orf20Q8ND61 904 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 DEF6Q9H4E7 631 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 EBF3Q9H4W6 596 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 C8orf33Q9H7E9 229 aaPredicted RBP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 HPS4Q9NQG7 708 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 METTL5Q9NRN9 209 aaKnown RBP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 HEBP1Q9NRV9 189 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL6A6-203ENST00000511332 PIAS3Q9Y6X2 628 aa13.41□□□□□ -0.26
COL6A6-203ENST00000511332 SSU72P8A0A1W2PR75 194 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ANKRD62A6NC57 917 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 TMEM221A6NGB7 291 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 GOLGA6L6A8MZA4 724 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 M0R296 226 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL6A6-203ENST00000511332 IRAK2O43187 625 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 RTN2O75298 545 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 TRUB2O95900 331 aaKnown RBP13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ADH1CP00326 375 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 IGLV3-25P01717 112 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 IGLV3-27P01718 113 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 MYBL1P10243 752 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ARSAP15289 507 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ADKP55263 362 aaKnown RBP13.4□□□□□ -0.26
COL6A6-203ENST00000511332 TBX4P57082 545 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 SLC44A4Q53GD3 710 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 SYPL2Q5VXT5 272 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 DNAJC24Q6P3W2 148 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 Q6ZNB5 142 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 TPRG1Q6ZUI0 275 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.4□□□□□ -0.26
COL6A6-203ENST00000511332 RALGPS2Q86X27 583 aaPredicted RBP13.4□□□□□ -0.26
COL6A6-203ENST00000511332 UNC45BQ8IWX7 931 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 BBS7Q8IWZ6 715 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 MCOLN2Q8IZK6 566 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 EXOC4Q96A65 974 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 SELENOOQ9BVL4 669 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 C1QTNF1Q9BXJ1 281 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ECT2Q9H8V3 914 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 DDIT4Q9NX09 232 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 GTSE1Q9NYZ3 720 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ARHGAP20Q9P2F6 1191 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 ADAMTS1Q9UHI8 967 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 TRIOO75962 3097 aa13.4□□□□□ -0.26
COL6A6-203ENST00000511332 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 KRBA1A5PL33 1030 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 TMCO5BA8MYB1 307 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 MAN2B1O00754 1011 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 SCAMP3O14828 347 aaKnown RBP13.39□□□□□ -0.27
COL6A6-203ENST00000511332 GREM1O60565 184 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 ADCY5O95622 1261 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 APOEP02649 317 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 CYP17A1P05093 508 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 PLEKP08567 350 aaPredicted RBP13.39□□□□□ -0.27
COL6A6-203ENST00000511332 SLC2A3P11169 496 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 DESP17661 470 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 CTHP32929 405 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 CHKAP35790 457 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 SULT1E1P49888 294 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms