RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SERINC2Q96SA4 455 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 CHCHD6Q9BRQ6 235 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 FUZQ9BT04 418 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZNF768Q9H5H4 540 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 CCDC134Q9H6E4 229 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 PLEKHA5Q9HAU0 1116 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 IRAK4Q9NWZ3 460 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 CLIC5Q9NZA1 410 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 AASSQ9UDR5 926 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 BAG5Q9UL15 447 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 RABGAP1Q9Y3P9 1069 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 LAS1LQ9Y4W2 734 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 ANKRD18BA2A2Z9 1011 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 WDR27A2RRH5 827 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 TMEM200CA6NKL6 621 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 M0QZQ0 153 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 PAX4O43316 350 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 USO1O60763 962 aaKnown RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 TJP3O95049 919 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 RTN3O95197 1032 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 ONECUT2O95948 504 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 ERBB2P04626 1255 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZFP36P26651 326 aaKnown RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 THBS4P35443 961 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 CCT4P50991 539 aaKnown RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 FAM3BP58499 235 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 TLE3Q04726 772 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 RESTQ13127 1097 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 SEMA3BQ13214 749 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 UBXN11Q5T124 520 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZNF618Q5T7W0 954 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 GRHL2Q6ISB3 625 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 DENND1BQ6P3S1 775 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 C16orf54Q6UWD8 224 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 MAVSQ7Z434 540 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 CAND1Q86VP6 1230 aaKnown RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 TBC1D22AQ8WUA7 517 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 MYEOVQ96EZ4 313 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 TEPSINQ96N21 525 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 PIGSQ96S52 555 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZNF703Q9H7S9 590 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 PLEKHA2Q9HB19 425 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 FBXO28Q9NVF7 368 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 ARHGAP26Q9UNA1 814 aa6.09□□□□□ -1.43
HMGB1P47-201ENST00000511281 PSMD9O00233 223 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 SPRY2O43597 315 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 ITGB3P05106 788 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 TNNT1P13805 278 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 DRD1P21728 446 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 DDX6P26196 483 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 GKP32189 559 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 MCM5P33992 734 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 PNPLA4P41247 253 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 CLNS1AP54105 237 aaKnown RBP6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 NAP1L1P55209 391 aaKnown RBP6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 RPL15P61313 204 aaKnown RBP6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 PDCLQ13371 301 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 DNASE1L3Q13609 305 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 FAM187BQ17R55 369 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 CBWD5Q5RIA9 395 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 LIPMQ5VYY2 423 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 VWA1Q6PCB0 445 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 KRBA2Q6ZNG9 492 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 ARMC8Q8IUR7 673 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 GALNT4Q8N4A0 578 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 FAM71DQ8N9W8 422 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 CPEB3Q8NE35 698 aaKnown RBP6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 GLMPQ8WWB7 406 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 RNF125Q96EQ8 232 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 EIF3CQ99613 913 aaKnown RBP6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 ALG8Q9BVK2 526 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 PHF7Q9BWX1 381 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 GDAQ9Y2T3 454 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 MAP3K2Q9Y2U5 619 aa6.08□□□□□ -1.44
HMGB1P47-201ENST00000511281 A0A1W2PPH5 198 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 A6NCN8 305 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 OTOL1A6NHN0 477 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 M0QYT0 321 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 MUSKO15146 869 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 KLK10O43240 276 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 PMPCBO75439 489 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 VNN1O95497 513 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 F9P00740 461 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 IL6RP08887 468 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 CHN1P15882 459 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 IGFBP2P18065 325 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 RPS6KB1P23443 525 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 CHMP24386 653 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 ADRA1DP25100 572 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 LIPAP38571 399 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 FOXL2P58012 376 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 TBL3Q12788 808 aaKnown RBP6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 THOC5Q13769 683 aaKnown RBP6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 ICAM4Q14773 271 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 ZNF124Q15973 351 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 CCDC30Q5VVM6 783 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 ACSM6Q6P461 480 aa6.07□□□□□ -1.44
HMGB1P47-201ENST00000511281 INO80CQ6PI98 192 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms