RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 JUPP14923 745 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 BMP5P22003 454 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 IL1R2P27930 398 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 ITPKBP27987 946 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 PTDSS1P48651 473 aaKnown RBP8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 CPT1AP50416 773 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 SOX10P56693 466 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 CCNIQ14094 377 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 ZNF750Q32MQ0 723 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 PTCHD3Q3KNS1 767 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 DEPDC1Q5TB30 811 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 KCTD20Q7Z5Y7 419 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 ITPRIPQ8IWB1 547 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 IZUMO1Q8IYV9 350 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 SPARTQ8N0X7 666 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 FAM83DQ9H4H8 585 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 GBA2Q9HCG7 927 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 SEMA4GQ9NTN9 838 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 ZNHIT2Q9UHR6 403 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 GABRQQ9UN88 632 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 CAMTA1Q9Y6Y1 1673 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 CD3EAPO15446 510 aaKnown RBP8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 TJP3O95049 919 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 A1BGP04217 495 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 FESP07332 822 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 BTF3P20290 206 aaKnown RBP8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 ALDH9A1P49189 494 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 SMN1Q16637 294 aaKnown RBP8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 CACHD1Q5VU97 1274 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 WDR53Q7Z5U6 358 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 TMEM57Q8N5G2 664 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 DNAJB14Q8TBM8 379 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 RSPRY1Q96DX4 576 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 ITGB1BP2Q9UKP3 347 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 LTN1O94822 1766 aa8.07□□□□□ -1.12
TRAPPC11-206ENST00000509857 C1orf167Q5SNV9 1468 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 TRPM3Q9HCF6 1732 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 POM121BA6NF01 834 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 CLCA1A8K7I4 914 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 RAB27BO00194 218 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 SRGAP2O75044 1071 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 DRD4P21917 467 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 STRIP1Q5VSL9 837 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 ANKRD16Q6P6B7 361 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 RP9Q8TA86 221 aaKnown RBP8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 TMEM171Q8WVE6 324 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 IQCDQ96DY2 449 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 TBCBQ99426 244 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 RIOX1Q9H6W3 641 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 ZNF212Q9UDV6 495 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 CEMIPQ8WUJ3 1361 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 PXDNLA1KZ92 1463 aa8.06□□□□□ -1.12
TRAPPC11-206ENST00000509857 MED1Q15648 1581 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 A0A1W2PPC4 97 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 AQP7P3A6NL99 342 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 THAP12O43422 761 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 C1QL1O75973 258 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 RASAL1O95294 804 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 NUDT3O95989 172 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 NBPF7P0C2Y1 421 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 TIAL1Q01085 375 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 MTHFSDQ2M296 383 aaKnown RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 PLAG1Q6DJT9 500 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 RNF44Q7L0R7 432 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 DPP9Q86TI2 863 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 RPAP2Q8IXW5 612 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 C8orf58Q8NAV2 365 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 ATP11CQ8NB49 1132 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 SMCR8Q8TEV9 937 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 SARAFQ96BY9 339 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 R3HDM4Q96D70 268 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 ZG16BQ96DA0 208 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 BBC3Q96PG8 261 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 KLK15Q9H2R5 256 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 UPF2Q9HAU5 1272 aaKnown RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 STARD7Q9NQZ5 370 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 DLL3Q9NYJ7 618 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 C11orf21Q9P2W6 132 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 PADI4Q9UM07 663 aa8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 LAS1LQ9Y4W2 734 aaKnown RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 IBTKQ9P2D0 1353 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC11-206ENST00000509857 PIAS2O75928 621 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 EBLN1P0CF75 366 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 TPH1P17752 444 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 EPHA3P29320 983 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 UQCRC1P31930 480 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 STT3AP46977 705 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 CCT8P50990 548 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 CCT4P50991 539 aaKnown RBP8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 ALDH5A1P51649 535 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 NUCB1Q02818 461 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 PICALMQ13492 652 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 TAF7Q15545 349 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 LY6KQ17RY6 165 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 MAP9Q49MG5 647 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 SLC9A4Q6AI14 798 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 ARHGEF25Q86VW2 580 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 TSPYL6Q8N831 410 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 VGLL2Q8N8G2 317 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms