RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SLC13A1Q9BZW2 595 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 MKS1Q9NXB0 559 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 NUMBLQ9Y6R0 609 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 E7ENQ6 273 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 ECM2O94769 699 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 LCP1P13796 627 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 ADORA2BP29275 332 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 HOXA11P31270 313 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 CCNFP41002 786 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 SERPINB9P50453 376 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 SOWAHAQ2M3V2 549 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 C18orf25Q96B23 403 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 ANKRD27Q96NW4 1050 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 NUDCD1Q96RS6 583 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 BTBD10Q9BSF8 475 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 C11orf84Q9BUA3 381 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 TRIM6Q9C030 488 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 DPEP3Q9H4B8 488 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 PLAC1Q9HBJ0 212 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 SMYD2Q9NRG4 433 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 PCDHA11Q9Y5I1 949 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 SCN1AP35498 2009 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 FAM159BA6NKW6 160 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 PEX11AO75192 247 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 RFPL1O75677 317 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 MYL2P10916 166 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 ACADSBP45954 432 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 SLC8A3P57103 927 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 CDC42EP1Q00587 391 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 SLC10A2Q12908 348 aaPredicted RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 BMPR2Q13873 1038 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 ANKRD20A2Q5SQ80 823 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 ANKRD20A1Q5TYW2 823 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 C9orf57Q5W0N0 161 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 NOTUMQ6P988 496 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 BZW1Q7L1Q6 419 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 ARMC2Q8NEN0 867 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 SH3TC2Q8TF17 1288 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 CLEC4CQ8WTT0 213 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 E2F7Q96AV8 911 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 CSPG4P5Q96PW8 444 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 ARL8BQ9NVJ2 186 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 LMNAP02545 664 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 CSH1P0DML2 217 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 CSH2P0DML3 217 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 CCDC130P13994 396 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 ATXN1P54253 815 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 TMPRSS15P98073 1019 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 TMEM62Q0P6H9 643 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 DGKDQ16760 1214 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 GLRA4Q5JXX5 417 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 ZNF534Q76KX8 674 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 DEPDC1BQ8WUY9 529 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 PTCD3Q96EY7 689 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 C7orf26Q96N11 449 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 KCTD15Q96SI1 283 aaPredicted RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 LPIN3Q9BQK8 851 aa18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 EIF2AQ9BY44 585 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 NKX1-2Q9UD57 310 aaPredicted RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 UBQLN1Q9UMX0 589 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-228ENST00000509552 RRN3P2A6NIE6 340 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 MMP3P08254 477 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 PDGFRBP09619 1106 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 GNL1P36915 607 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 ARL4AP40617 200 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 MRPS5P82675 430 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 SEMA5AQ13591 1074 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 KRT72Q14CN4 511 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 ZNF467Q7Z7K2 595 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 TFB1MQ8WVM0 346 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 OXNAD1Q96HP4 312 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 FAM49AQ9H0Q0 323 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 ADAMTS10Q9H324 1103 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 SNX25Q9H3E2 840 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 FBXO6Q9NRD1 293 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 SETD4Q9NVD3 440 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 MTMR10Q9NXD2 777 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 RNF181Q9P0P0 153 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 HES2Q9Y543 173 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 HACD1B0YJ81 288 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 GYG2O15488 501 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 STRNO43815 780 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 UGT1A9O60656 530 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 FBXO47Q5MNV8 452 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 NUDCD3Q8IVD9 361 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 NDUFAF2Q8N183 169 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 CRYBG2Q8N1P7 616 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 MPP5Q8N3R9 675 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 OR6J1Q8NGC5 347 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 HTR3CQ8WXA8 447 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 KATNBL1Q9H079 304 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 DENND2DQ9H6A0 471 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 UGT1A7Q9HAW7 530 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 UGT1A10Q9HAW8 530 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 UGT1A8Q9HAW9 530 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 BATF3Q9NR55 127 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 PCMTD2Q9NV79 361 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 KCNK4Q9NYG8 393 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms