RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MARK1Q9P0L2 795 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 FBXO10Q9UK96 956 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 AGO1Q9UL18 857 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 STRIP2Q9ULQ0 834 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 PCDHGC3Q9UN70 934 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 HBS1LQ9Y450 684 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 MYO18AQ92614 2054 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 PES1O00541 588 aaKnown RBP16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 TRIM24O15164 1050 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 TULP3O75386 442 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 LTFP02788 710 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 CISD3P0C7P0 127 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 UCHL3P15374 230 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 ZNF18P17022 549 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 TNFRSF4P43489 277 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 BPIFB4P59827 614 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 MYL5Q02045 173 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 MSANTD2Q6P1R3 559 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 ZC3H14Q6PJT7 736 aaKnown RBP16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 TPGS1Q6ZTW0 290 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 DENND1CQ8IV53 801 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 CCDC26Q8TAB7 109 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 ARHGEF4Q9NR80 690 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 DEC1Q9P2X7 70 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 FHOD1Q9Y613 1164 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 USP34Q70CQ2 3546 aa16.87■□□□□ 0.29
PDLIM5-212ENST00000509333 FANCMQ8IYD8 2048 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 HRO43593 1189 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 LMNAP02545 664 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 APODP05090 189 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 PNMA6AP0CW24 399 aaPredicted RBP16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 CHKAP35790 457 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 FNTBP49356 437 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 COPB1P53618 953 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 MRPS21P82921 87 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 C2orf27AQ580R0 203 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 BEND5Q7L4P6 421 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 SYT13Q7L8C5 426 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 RPLP0P6Q8NHW5 317 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 PLD4Q96BZ4 506 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 LSM14BQ9BX40 385 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 BBS2Q9BXC9 721 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 HCN2Q9UL51 889 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 NAALADL1Q9UQQ1 740 aa16.86■□□□□ 0.29
PDLIM5-212ENST00000509333 TBC1D3BA6NDS4 549 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 TYRP14679 529 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 CDK11BP21127 795 aaKnown RBP16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 CORO1AP31146 461 aaKnown RBP16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 KRT9P35527 623 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 KIR2DL1P43626 348 aaPredicted RBP16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 KLK7P49862 253 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 SYPL2Q5VXT5 272 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 CAVIN1Q6NZI2 390 aaKnown RBP16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 LONP2Q86WA8 852 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 FAM217AQ8IXS0 508 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 CPXM2Q8N436 756 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 CAMKK1Q8N5S9 505 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 PPP1R13BQ96KQ4 1090 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 GANQ9H2C0 597 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 TJP2Q9UDY2 1190 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 STOML2Q9UJZ1 356 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 SLC8A2Q9UPR5 921 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 SIK3Q9Y2K2 1263 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 STARD13Q9Y3M8 1113 aa16.85■□□□□ 0.29
PDLIM5-212ENST00000509333 SDK1Q7Z5N4 2213 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 OTOGLQ3ZCN5 2332 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 E5RJQ4 531 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 GFRA2O00451 464 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 CACNG3O60359 315 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 PENKP01210 267 aaPredicted RBP16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 CYP11B1P15538 503 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 SEC13P55735 322 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 PDCLQ13371 301 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 RAPGEF1Q13905 1077 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 TAF5Q15542 800 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 ANO6Q4KMQ2 910 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 FYB2Q5VWT5 728 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 HEATR6Q6AI08 1181 aaKnown RBP16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 CCDC33Q8N5R6 958 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 DDX1Q92499 740 aaKnown RBP16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 AZIN2Q96A70 460 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 CPXM1Q96SM3 734 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 BPIFA3Q9BQP9 254 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 FUCA2Q9BTY2 467 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 PLK2Q9NYY3 685 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 MYO16Q9Y6X6 1858 aa16.84■□□□□ 0.29
PDLIM5-212ENST00000509333 CCDC163A0A0D9SF12 145 aa16.83■□□□□ 0.28
PDLIM5-212ENST00000509333 NEDD8-MDP1E9PL57 170 aa16.83■□□□□ 0.28
PDLIM5-212ENST00000509333 SART1O43290 800 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-212ENST00000509333 MSI1O43347 362 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-212ENST00000509333 IGLV3-27P01718 113 aa16.83■□□□□ 0.28
PDLIM5-212ENST00000509333 TPM2P07951 284 aa16.83■□□□□ 0.28
PDLIM5-212ENST00000509333 NCAM1P13591 858 aa16.83■□□□□ 0.28
PDLIM5-212ENST00000509333 HARS2P49590 506 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms