RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	PPP1R9B	Q96SB3	815 aa		4.95	□□□□□ -1.62
NFKB1-208	ENST00000509165	ZSCAN32	Q9NX65	697 aa		4.95	□□□□□ -1.62
NFKB1-208	ENST00000509165	STK26	Q9P289	416 aa		4.95	□□□□□ -1.62
NFKB1-208	ENST00000509165	ADAMTS5	Q9UNA0	930 aa		4.95	□□□□□ -1.62
NFKB1-208	ENST00000509165	BCL9	O00512	1426 aa		4.95	□□□□□ -1.62
NFKB1-208	ENST00000509165	KCP	Q6ZWJ8	1503 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	NHS	Q6T4R5	1651 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	LOC102723971	A0A1B0GUV8	181 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	QSOX1	O00391	747 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	LATS1	O95835	1130 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	PRKCG	P05129	697 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	ZKSCAN1	P17029	563 aa	Predicted RBP	4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	LBX1	P52954	281 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	PRKAG1	P54619	331 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	BCAT1	P54687	386 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	PDE1A	P54750	535 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	INSC	Q1MX18	579 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	PCID2	Q5JVF3	399 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	SLC29A4	Q7RTT9	530 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	ZNF804A	Q7Z570	1209 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	CAND1	Q86VP6	1230 aa	Known RBP	4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	DNAJB14	Q8TBM8	379 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	XAGE5	Q8WWM1	108 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	MACROD1	Q9BQ69	325 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	C17orf80	Q9BSJ5	609 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	STK31	Q9BXU1	1019 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	BTBD1	Q9H0C5	482 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	CHST8	Q9H2A9	424 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	DHX36	Q9H2U1	1008 aa	Known RBP	4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	ZNF287	Q9HBT7	754 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	TRMT13	Q9NUP7	481 aa	Known RBP	4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	OGDHL	Q9ULD0	1010 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	PCDHGB6	Q9Y5F9	930 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	IGSF1	Q8N6C5	1336 aa		4.94	□□□□□ -1.62
NFKB1-208	ENST00000509165	QRICH2	Q9H0J4	1663 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	LINC01548	A6NM66	108 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	TISP43	B9A030	160 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165		F8W8V4	182 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165		H7C4K7	107 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	CD3EAP	O15446	510 aa	Known RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	RRP9	O43818	475 aa	Known RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	MGEA5	O60502	916 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	MAP4K4	O95819	1239 aa	Predicted RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	TXN	P10599	105 aa	Known RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	TPTE	P56180	551 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	HTRA4	P83105	476 aa	Predicted RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	CCNI	Q14094	377 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	PKD1L3	Q7Z443	1732 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	KRT78	Q8N1N4	520 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	FANCB	Q8NB91	859 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	CTHRC1	Q96CG8	243 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	PRR25	Q96S07	402 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	MID2	Q9UJV3	735 aa		4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	COL3A1	P02461	1466 aa	Predicted RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	COL5A2	P05997	1499 aa	Predicted RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	VIRMA	Q69YN4	1812 aa	Known RBP	4.93	□□□□□ -1.62
NFKB1-208	ENST00000509165	KIAA1551	Q9HCM1	1747 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	SRGAP2	O75044	1071 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	RASSF9	O75901	435 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	PRKCB	P05771	671 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	NPS	P0C0P6	89 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	HSPA8	P11142	646 aa	Known RBP	4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	RPL17	P18621	184 aa	Known RBP	4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	UQCRC1	P31930	480 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	PTDSS1	P48651	473 aa	Known RBP	4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	CTCF	P49711	727 aa	Predicted RBP	4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	ZNF750	Q32MQ0	723 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	SUMO4	Q6EEV6	95 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	PPP4R4	Q6NUP7	873 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	MTHFD1L	Q6UB35	978 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	DPY19L3	Q6ZPD9	716 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	SPART	Q8N0X7	666 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	PHKB	Q93100	1093 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	SH3BP4	Q9P0V3	963 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	CHPF2	Q9P2E5	772 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	DKK4	Q9UBT3	224 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	CAPN11	Q9UMQ6	739 aa		4.92	□□□□□ -1.62
NFKB1-208	ENST00000509165	SZT2	Q5T011	3432 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	C10orf71	Q711Q0	1435 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	AGPS	O00116	658 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	PDE8B	O95263	885 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	MT-ND5	P03915	603 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	DLD	P09622	509 aa	Known RBP	4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	BTF3	P20290	206 aa	Known RBP	4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	ACVR2A	P27037	513 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	TIRAP	P58753	221 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	HOXA4	Q00056	320 aa	Predicted RBP	4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	PSG6	Q00889	435 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	E2F1	Q01094	437 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	ARHGEF7	Q14155	803 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	TBC1D25	Q3MII6	688 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	RNASE12	Q5GAN4	147 aa	Known RBP	4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	CACHD1	Q5VU97	1274 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	LRCH2	Q5VUJ6	765 aa		4.91	□□□□□ -1.62
NFKB1-208	ENST00000509165	NAPRT	Q6XQN6	538 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms