RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PAPLNO95428 1278 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 IGLV3-25P01717 112 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 SLC2A3P11169 496 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 DDX6P26196 483 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFC1-211ENST00000509084 MIPP30301 263 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 EPHA5P54756 1037 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 HDAC4P56524 1084 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 AMPD2Q01433 879 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 SLC25A11Q02978 314 aaKnown RBP10.81□□□□□ -0.68
RFC1-211ENST00000509084 C10orf120Q5SQS8 335 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 HECTD3Q5T447 861 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 ZFYVE27Q5T4F4 411 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 ACBD5Q5T8D3 534 aaPredicted RBP10.81□□□□□ -0.68
RFC1-211ENST00000509084 ZNF697Q5TEC3 545 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 TMEM184AQ6ZMB5 413 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 RBM23Q86U06 439 aaKnown RBP10.81□□□□□ -0.68
RFC1-211ENST00000509084 TAC4Q86UU9 113 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 TMC8Q8IU68 726 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 KATNAL2Q8IYT4 538 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 NTAN1Q96AB6 310 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 OSBPL9Q96SU4 736 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 NAP1L3Q99457 506 aaPredicted RBP10.81□□□□□ -0.68
RFC1-211ENST00000509084 NACA2Q9H009 215 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFC1-211ENST00000509084 MARCH2Q9P0N8 246 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 PACSIN2Q9UNF0 486 aaPredicted RBP10.81□□□□□ -0.68
RFC1-211ENST00000509084 TLR6Q9Y2C9 796 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 HBS1LQ9Y450 684 aaKnown RBP10.81□□□□□ -0.68
RFC1-211ENST00000509084 CLUHO75153 1309 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 RFXAPO00287 272 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 KCNK3O14649 394 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 ZNF197O14709 1029 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 CCL16O15467 120 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 NCK2O43639 380 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 TADA3O75528 432 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 ZRANB2O95218 330 aaKnown RBP eCLIP10.8□□□□□ -0.68
RFC1-211ENST00000509084 APOEP02649 317 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 F11P03951 625 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 HOXB8P17481 243 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 POU3F3P20264 500 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 GABRR2P28476 465 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 CCR1P32246 355 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 GJC1P36383 396 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 ATP5C1P36542 298 aaKnown RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 CXCR3P49682 368 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 PEX5P50542 639 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 ZNF135P52742 658 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 TAS2R40P59535 323 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 COPS2P61201 443 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 RING1Q06587 406 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 CKAP4Q07065 602 aaKnown RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 SCAPQ12770 1279 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 NME3Q13232 169 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 KCNC3Q14003 757 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 PPP2R5DQ14738 602 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 TRIP4Q15650 581 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 WHAMMP3Q1A5X7 153 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 ARHGAP15Q53QZ3 475 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 OTUD1Q5VV17 481 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 SCYL2Q6P3W7 929 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 PDZD4Q76G19 769 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 VSIG1Q86XK7 387 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 MAP7D3Q8IWC1 876 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 RCOR2Q8IZ40 523 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 ARFGAP1Q8N6T3 406 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 EFHBQ8N7U6 833 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 EXD1Q8NHP7 514 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 KRT35Q92764 455 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 CORO1BQ9BR76 489 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 LRRC3Q9BY71 257 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 IL21Q9HBE4 155 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 ZNF334Q9HCZ1 680 aaPredicted RBP10.8□□□□□ -0.68
RFC1-211ENST00000509084 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.8□□□□□ -0.68
RFC1-211ENST00000509084 OSER1Q9NX31 292 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 RASAL2Q9UJF2 1139 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 DNMT3LQ9UJW3 386 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 CDC23Q9UJX2 597 aa10.8□□□□□ -0.68
RFC1-211ENST00000509084 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 CCDC195A0A1B0GUA6 201 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 C2orf72A6NCS6 295 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 ZNF487B1APH4 448 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 FANCGO15287 622 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 RFPL2O75678 378 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 OLFM2O95897 454 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 OAS1P00973 400 aaKnown RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 KRT1P04264 644 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 MYL4P12829 197 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 TFE3P19532 575 aaPredicted RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 PAFAH1B1P43034 410 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 DNA2P51530 1060 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 PITX1P78337 314 aaPredicted RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 COG7P83436 770 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 HYAL1Q12794 435 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 EFEMP1Q12805 493 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 EIF4EBP2Q13542 120 aaPredicted RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 PDK2Q15119 407 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 PPP2R5EQ16537 467 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 TCEAL5Q5H9L2 206 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 EFHC2Q5JST6 749 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms