RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 TXLNGQ9NUQ3 528 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 TFCP2L1Q9NZI6 479 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 STXBP5LQ9Y2K9 1186 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 RPS6KL1Q9Y6S9 549 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 H3BNX3 289 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 M0R3H8 397 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 AP1G1O43747 822 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 MGEA5O60502 916 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 PQBP1O60828 265 aaKnown RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 NBNO60934 754 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 RNASEH2AO75792 299 aaKnown RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 XRCC6P12956 609 aaKnown RBP eCLIP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 NPR1P16066 1061 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 RPL17P18621 184 aaKnown RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 DIO1P49895 249 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 NAP1L1P55209 391 aaKnown RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 SATB1Q01826 763 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 LARS2Q15031 903 aaKnown RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 PTCHD3Q3KNS1 767 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 PLA1AQ53H76 456 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 CCDC157Q569K6 752 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 C18orf65Q6ZTR6 163 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 CCDC149Q6ZUS6 474 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 PTCHD4Q6ZW05 846 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 RSRC2Q7L4I2 434 aaKnown RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC15A4Q8N697 577 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 DNAJC5GQ8N7S2 189 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 NAXEQ8NCW5 288 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 DEPTORQ8TB45 409 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC35G2Q8TBE7 412 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 BPIFB1Q8TDL5 484 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 WIPF2Q8TF74 440 aaPredicted RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 CUL5Q93034 780 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 CCDC17Q96LX7 622 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 NUP62CLQ9H1M0 184 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 MYLK2Q9H1R3 596 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC12A5Q9H2X9 1139 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 ARMT1Q9H993 441 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 RASSF1Q9NS23 344 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMEM184CQ9NVA4 438 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 PIH1D1Q9NWS0 290 aaKnown RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 C9orf78Q9NZ63 289 aaPredicted RBP2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 HEY2Q9UBP5 337 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 LPAR3Q9UBY5 353 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 POLG2Q9UHN1 485 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 ICKQ9UPZ9 632 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 SQORQ9Y6N5 450 aa2.77□□□□□ -1.97
DEPDC1B-204ENST00000509006 FAM170AA1A519 330 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 GOLIM4O00461 696 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CES2O00748 559 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 FIBPO43427 364 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 GCATO75600 419 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CRYABP02511 175 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CTSAP10619 480 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 PSG1P11464 419 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 VDRP11473 427 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CYP19A1P11511 503 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 MAPK9P45984 424 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CLNS1AP54105 237 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 BCAT1P54687 386 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 EIF5P55010 431 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 SUMO2P61956 95 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 ID2Q02363 134 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 TNFAIP2Q03169 654 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZNF91Q05481 1191 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CTBP1Q13363 440 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZNF585BQ52M93 769 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CERCAMQ5T4B2 595 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMTC4Q5T4D3 741 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 MZT2AQ6P582 158 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 C4orf50Q6ZRC1 276 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 RFX8Q6ZV50 586 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 MAATS1Q7Z4T9 603 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 PELI3Q8N2H9 469 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 NKAPQ8N5F7 415 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZNF548Q8NEK5 533 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 POF1BQ8WVV4 589 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 KBTBD7Q8WVZ9 684 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 PPP2R3CQ969Q6 453 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 GCC1Q96CN9 775 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 C1GALT1C1Q96EU7 318 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 KAZALD1Q96I82 304 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 THOC3Q96J01 351 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZFYVE19Q96K21 471 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 PPM1MQ96MI6 270 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 SMURF2Q9HAU4 748 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 GBA2Q9HCG7 927 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 AGO4Q9HCK5 861 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZBTB40Q9NUA8 1239 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 STAP2Q9UGK3 403 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 NRBP1Q9UHY1 535 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 CPA4Q9UI42 421 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 ASAP1Q9ULH1 1129 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 NOL7Q9UMY1 257 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 DRG1Q9Y295 367 aaKnown RBP2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 TTLL3Q9Y4R7 772 aa2.76□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMEM233B4DJY2 109 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 MYO1CO00159 1063 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 TPP1O14773 563 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms