RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 PRAMEF12O95522 483 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 TRUB2O95900 331 aaKnown RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 IGLV3-27P01718 113 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 ABCB4P21439 1286 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 GPD1P21695 349 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 FLT3P36888 993 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 PGFP49763 221 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 ZNF143P52747 638 aaPredicted RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 FCHO2Q0JRZ9 810 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 EFEMP1Q12805 493 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 ACAP1Q15027 740 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 TCEAL1Q15170 157 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 TRIP4Q15650 581 aaPredicted RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 ZNF77Q15935 545 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 C2CD6Q53TS8 623 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 SND1Q7KZF4 910 aaKnown RBP eCLIP10.69□□□□□ -0.7
HTT-204ENST00000508321 STRADAQ7RTN6 431 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 MIB1Q86YT6 1006 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 BPIFB1Q8TDL5 484 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 NDRG1Q92597 394 aaKnown RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 KHSRPQ92945 711 aaKnown RBP eCLIP10.69□□□□□ -0.7
HTT-204ENST00000508321 USP13Q92995 863 aaPredicted RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 OTUB2Q96DC9 234 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 RPGRIP1Q96KN7 1286 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 ZFRQ96KR1 1074 aaKnown RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 MCEEQ96PE7 176 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 SLC22A12Q96S37 553 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 PPP1R9BQ96SB3 815 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 NPY6RQ99463 290 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 DDX23Q9BUQ8 820 aaKnown RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 TSGA10Q9BZW7 698 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 THG1LQ9NWX6 298 aaKnown RBP10.69□□□□□ -0.7
HTT-204ENST00000508321 TBC1D14Q9P2M4 693 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 NAALADL1Q9UQQ1 740 aa10.69□□□□□ -0.7
HTT-204ENST00000508321 COL4A2P08572 1712 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 BTNL10A8MVZ5 291 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 ZNF263O14978 683 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 ATMINO43313 823 aaPredicted RBP10.68□□□□□ -0.7
HTT-204ENST00000508321 GRAP2O75791 330 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 MTA2O94776 668 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 APOEP02649 317 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 BMP1P13497 986 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 PDGFRAP16234 1089 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 PSMC3P17980 439 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 RDXP35241 583 aaKnown RBP10.68□□□□□ -0.7
HTT-204ENST00000508321 MAGEA1P43355 309 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 HARS2P49590 506 aaKnown RBP10.68□□□□□ -0.7
HTT-204ENST00000508321 SULT1E1P49888 294 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 VAV2P52735 878 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 AIF1P55008 147 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 CCZ1BP86790 482 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 CCZ1P86791 482 aaPredicted RBP10.68□□□□□ -0.7
HTT-204ENST00000508321 PPP2R5DQ14738 602 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 MTF1Q14872 753 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 PDGFRLQ15198 375 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 TAF5Q15542 800 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 ARHGAP29Q52LW3 1261 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 BRMS1LQ5PSV4 323 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 CC2D1AQ6P1N0 951 aaPredicted RBP10.68□□□□□ -0.7
HTT-204ENST00000508321 RAD9BQ6WBX8 426 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 BNIPLQ7Z465 357 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 UNC45BQ8IWX7 931 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 NIPA2Q8N8Q9 360 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 ZNF564Q8TBZ8 553 aaPredicted RBP10.68□□□□□ -0.7
HTT-204ENST00000508321 SH3RF2Q8TEC5 729 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 AZIN2Q96A70 460 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 ZSWIM3Q96MP5 696 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 CNPY3Q9BT09 278 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 NUP85Q9BW27 656 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 KLF16Q9BXK1 252 aaPredicted RBP10.68□□□□□ -0.7
HTT-204ENST00000508321 RNF38Q9H0F5 515 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 DDIT4Q9NX09 232 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 IP6K2Q9UHH9 426 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 SH3BP1Q9Y3L3 701 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 PCDHA13Q9Y5I0 950 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 NUMBLQ9Y6R0 609 aa10.68□□□□□ -0.7
HTT-204ENST00000508321 C5orf42Q9H799 3197 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 SLC12A8A0AV02 714 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 TMEM191CA6NGB0 347 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 HEPACAM2A8MVW5 462 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 M0QYT0 321 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 LEFTY2O00292 366 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 STC2O76061 302 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 CCDC175P0C221 793 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 CCR1P32246 355 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 MAN1A1P33908 653 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 RFC1P35251 1148 aaPredicted RBP10.67□□□□□ -0.7
HTT-204ENST00000508321 ARHGAP25P42331 645 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 HADHBP55084 474 aaKnown RBP10.67□□□□□ -0.7
HTT-204ENST00000508321 TBX4P57082 545 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 RNASE9P60153 205 aaKnown RBP10.67□□□□□ -0.7
HTT-204ENST00000508321 EIF4EBP2Q13542 120 aaPredicted RBP10.67□□□□□ -0.7
HTT-204ENST00000508321 PIGHQ14442 188 aaPredicted RBP10.67□□□□□ -0.7
HTT-204ENST00000508321 SYPL2Q5VXT5 272 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 HTR3DQ70Z44 454 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 KIAA1328Q86T90 577 aa10.67□□□□□ -0.7
HTT-204ENST00000508321 MFSD6LQ8IWD5 586 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms