RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 SPATA2LQ8IUW3 424 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 FAM114A1Q8IWE2 563 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 ARL14EPQ8N8R7 260 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 OR6B3Q8NGW1 331 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 ELOVL4Q9GZR5 314 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 IL21RQ9HBE5 538 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 TRPC7Q9HCX4 862 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 CALCOCO1Q9P1Z2 691 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 KIAA1522Q9P206 1035 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 MAGEC2Q9UBF1 373 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 NXF1Q9UBU9 619 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 ARHGAP26Q9UNA1 814 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 MAGED2Q9UNF1 606 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 CTNND2Q9UQB3 1225 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 COQ4Q9Y3A0 265 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 CKAP5Q14008 2032 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 TRIM49BA6NDI0 452 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 EIF4E1BA6NMX2 242 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 BIN1O00499 593 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 SCAMP3O14828 347 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 TRIM66O15016 1216 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 AP5Z1O43299 807 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 ALDH1A2O94788 518 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 KAT7O95251 611 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 NFATC1O95644 943 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 OLFM2O95897 454 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 CKMP06732 381 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 USP17L7P0C7H9 530 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 TRIM49P0CI25 452 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 TRIM49CP0CI26 452 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 CD44P16070 742 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 ITPKBP27987 946 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 EIF2DP41214 584 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 ATXN3P54252 364 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 PMS1P54277 932 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 RPL6Q02878 288 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 PPP3CAQ08209 521 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 DDR2Q16832 855 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 HSF5Q4G112 596 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 DCAF17Q5H9S7 520 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 RBM43Q6ZSC3 357 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 OSTM1Q86WC4 334 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 ETFBKMTQ8IXQ9 262 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 MYCBPAPQ8TBZ2 947 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 TAS1R2Q8TE23 839 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 SLC35C1Q96A29 364 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 EXOC4Q96A65 974 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 FAM81BQ96LP2 452 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 HSPA12BQ96MM6 686 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 PI4K2AQ9BTU6 479 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 RAB20Q9NX57 234 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 MYH10P35580 1976 aa9.73□□□□□ -0.85
UBE2D3-223ENST00000508249 CABIN1Q9Y6J0 2220 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 SPTA1P02549 2419 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 TRAV19A0A0A6YYK7 116 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 TRABD2BA6NFA1 517 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 LEFTY2O00292 366 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 MAP3K13O43283 966 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 HCRTO43612 131 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 ATXN1LP0C7T5 689 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 PFKLP17858 780 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 NDUFV2P19404 249 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 TBXAS1P24557 533 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 CYP2F1P24903 491 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 ANXA13P27216 316 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 ASPAP45381 313 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 KDSRQ06136 332 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 DHCR24Q15392 516 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 TPD52L1Q16890 204 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 ISM2Q6H9L7 571 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 RHBDF2Q6PJF5 856 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 DBX2Q6ZNG2 339 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 LURAP1LQ8IV03 231 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 ADGRG2Q8IZP9 1017 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 B3GALNT2Q8NCR0 500 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 TTC16Q8NEE8 873 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 CCDC26Q8TAB7 109 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 PIP4K2CQ8TBX8 421 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 MYLPFQ96A32 169 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 SPATA17Q96L03 361 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 DUSP9Q99956 384 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 MRPL45Q9BRJ2 306 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 COMMD8Q9NX08 183 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 GTF3C4Q9UKN8 822 aa9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 APOBEC2Q9Y235 224 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-223ENST00000508249 KNL1Q8NG31 2342 aa9.71□□□□□ -0.85
UBE2D3-223ENST00000508249 FAM149AA5PLN7 773 aa9.71□□□□□ -0.86
UBE2D3-223ENST00000508249 TLX3O43711 291 aaPredicted RBP9.71□□□□□ -0.86
UBE2D3-223ENST00000508249 PTPN1P18031 435 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-223ENST00000508249 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-223ENST00000508249 LMO2P25791 158 aa9.71□□□□□ -0.86
UBE2D3-223ENST00000508249 ABCG1P45844 678 aa9.71□□□□□ -0.86
UBE2D3-223ENST00000508249 PPP3CCP48454 512 aa9.71□□□□□ -0.86
UBE2D3-223ENST00000508249 FMO5P49326 533 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms