RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RPAINQ86UA6 219 aa15.03■□□□□ -0
DDX41-208ENST00000507955 UNC93AQ86WB7 457 aa15.03■□□□□ -0
DDX41-208ENST00000507955 UNC5BQ8IZJ1 945 aa15.03■□□□□ -0
DDX41-208ENST00000507955 CRYBG2Q8N1P7 616 aa15.03■□□□□ -0
DDX41-208ENST00000507955 TTC39CQ8N584 583 aa15.03■□□□□ -0
DDX41-208ENST00000507955 UTP4Q969X6 686 aaKnown RBP15.03■□□□□ -0
DDX41-208ENST00000507955 CSPG4P5Q96PW8 444 aa15.03■□□□□ -0
DDX41-208ENST00000507955 C11orf84Q9BUA3 381 aaPredicted RBP15.03■□□□□ -0
DDX41-208ENST00000507955 SCN4AP35499 1836 aa15.03■□□□□ -0
DDX41-208ENST00000507955 PRPF4O43172 522 aaKnown RBP eCLIP15.03■□□□□ -06e-6■■■■□ 20.1
DDX41-208ENST00000507955 ANP32DO95626 131 aa15.03■□□□□ -0
DDX41-208ENST00000507955 C6orf222P0C671 652 aaPredicted RBP15.03■□□□□ -0
DDX41-208ENST00000507955 PTK7Q13308 1070 aa15.03■□□□□ -0
DDX41-208ENST00000507955 SPARCL1Q14515 664 aa15.03■□□□□ -0
DDX41-208ENST00000507955 PAN2Q504Q3 1202 aaKnown RBP15.03■□□□□ -0
DDX41-208ENST00000507955 HHATQ5VTY9 493 aa15.03■□□□□ -0
DDX41-208ENST00000507955 RNF43Q68DV7 783 aa15.03■□□□□ -0
DDX41-208ENST00000507955 SLC26A9Q7LBE3 791 aa15.03■□□□□ -0
DDX41-208ENST00000507955 RNF169Q8NCN4 708 aa15.03■□□□□ -0
DDX41-208ENST00000507955 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
DDX41-208ENST00000507955 KCNK16Q96T55 309 aa15.03■□□□□ -0
DDX41-208ENST00000507955 TACO1Q9BSH4 297 aaKnown RBP15.03■□□□□ -0
DDX41-208ENST00000507955 RHOBTB2Q9BYZ6 727 aa15.03■□□□□ -0
DDX41-208ENST00000507955 TMEM30AQ9NV96 361 aa15.03■□□□□ -0
DDX41-208ENST00000507955 C17orf102A2RUQ5 167 aa15.02■□□□□ -0
DDX41-208ENST00000507955 I3L4J1 428 aa15.02■□□□□ -0
DDX41-208ENST00000507955 CYB561D2O14569 222 aa15.02■□□□□ -0
DDX41-208ENST00000507955 CTGFP29279 349 aa15.02■□□□□ -0
DDX41-208ENST00000507955 MLH1P40692 756 aa15.02■□□□□ -0
DDX41-208ENST00000507955 MAP3K7CLP57077 242 aa15.02■□□□□ -0
DDX41-208ENST00000507955 PPM1NQ8N819 430 aa15.02■□□□□ -0
DDX41-208ENST00000507955 GBP7Q8N8V2 638 aaPredicted RBP15.02■□□□□ -0
DDX41-208ENST00000507955 NSMCE1Q8WV22 266 aa15.02■□□□□ -0
DDX41-208ENST00000507955 PTPRN2Q92932 1015 aa15.02■□□□□ -0
DDX41-208ENST00000507955 DHRS4Q9BTZ2 278 aa15.02■□□□□ -0
DDX41-208ENST00000507955 SMYD2Q9NRG4 433 aa15.02■□□□□ -0
DDX41-208ENST00000507955 MIOSQ9NXC5 875 aa15.02■□□□□ -0
DDX41-208ENST00000507955 MRPL42Q9Y6G3 142 aaKnown RBP15.02■□□□□ -0
DDX41-208ENST00000507955 HAS3O00219 553 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 MDM4O15151 490 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 CREB3O43889 395 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 PGK1P00558 417 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 CD4P01730 458 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 CCNB1P14635 433 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 SULT1E1P49888 294 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 CACNA2D1P54289 1103 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 OLIG2Q13516 323 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 BMPR2Q13873 1038 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 FSCN1Q16658 493 aaKnown RBP15.02□□□□□ -0.01
DDX41-208ENST00000507955 MDH1BQ5I0G3 518 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 TRMT10BQ6PF06 316 aaKnown RBP15.02□□□□□ -0.01
DDX41-208ENST00000507955 CXCL17Q6UXB2 119 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 TEKT4Q8WW24 435 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 GAD1Q99259 594 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 MYLK2Q9H1R3 596 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 DTLQ9NZJ0 730 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 KLHL14Q9P2G3 628 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 SLC17A6Q9P2U8 582 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 MAD1L1Q9Y6D9 718 aa15.02□□□□□ -0.01
DDX41-208ENST00000507955 PYGBP11216 843 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 TGM2P21980 687 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 ZNF157P51786 506 aaPredicted RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 NR1H3Q13133 447 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 DPYSL2Q16555 572 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 OTUD1Q5VV17 481 aaPredicted RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 NCBP2-AS2Q69YL0 99 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 DENND5BQ6ZUT9 1274 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 C3orf58Q8NDZ4 430 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 GSTCDQ8NEC7 633 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 CENPIQ92674 756 aaPredicted RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 CYTH2Q99418 400 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 ZNF670Q9BS34 389 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 AP5M1Q9H0R1 490 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 GDAP2Q9NXN4 497 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.01□□□□□ -0.01
DDX41-208ENST00000507955 PAK5Q9P286 719 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 ZC3H7BQ9UGR2 993 aaKnown RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 CHKBQ9Y259 395 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 MKI67P46013 3256 aaKnown RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 NRP1O14786 923 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 SETSIPP0DME0 302 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 VAV1P15498 845 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 PURAQ00577 322 aaKnown RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 CDHR3Q6ZTQ4 885 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 APBB1IPQ7Z5R6 666 aaPredicted RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 LRRC8CQ8TDW0 803 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 STK32AQ8WU08 396 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 ZNF75CPQ92670 426 aaPredicted RBP15.01□□□□□ -0.01
DDX41-208ENST00000507955 MED10Q9BTT4 135 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 ANLNQ9NQW6 1124 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 C15orf41Q9Y2V0 281 aa15.01□□□□□ -0.01
DDX41-208ENST00000507955 BCLAF3A2AJT9 711 aaKnown RBP15□□□□□ -0.01
DDX41-208ENST00000507955 CHADO15335 359 aa15□□□□□ -0.01
DDX41-208ENST00000507955 UNC5CO95185 931 aa15□□□□□ -0.01
DDX41-208ENST00000507955 TOP3BO95985 862 aaKnown RBP15□□□□□ -0.01
DDX41-208ENST00000507955 C1QAP02745 245 aa15□□□□□ -0.01
DDX41-208ENST00000507955 KCNE1P15382 129 aa15□□□□□ -0.01
DDX41-208ENST00000507955 PTPN9P43378 593 aa15□□□□□ -0.01
DDX41-208ENST00000507955 CPT1AP50416 773 aa15□□□□□ -0.01
DDX41-208ENST00000507955 CLCNKBP51801 687 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms