RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PIGWQ7Z7B1 504 aa18.32■□□□□ 0.52
SFXN1-208ENST00000507823 FBXO36Q8NEA4 188 aa18.32■□□□□ 0.52
SFXN1-208ENST00000507823 ACBD6Q9BR61 282 aa18.32■□□□□ 0.52
SFXN1-208ENST00000507823 PAAF1Q9BRP4 392 aa18.32■□□□□ 0.52
SFXN1-208ENST00000507823 MAGEB5Q9BZ81 275 aa18.32■□□□□ 0.52
SFXN1-208ENST00000507823 TMEM30AQ9NV96 361 aa18.32■□□□□ 0.52
SFXN1-208ENST00000507823 FRMPD3Q5JV73 1810 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 NRP1O14786 923 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 PRPF4O43172 522 aaKnown RBP eCLIP18.31■□□□□ 0.522e-11■■■□□ 18.7
SFXN1-208ENST00000507823 SPAG6O75602 509 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 AP1G2O75843 785 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 ODC1P11926 461 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 GEMIN4P57678 1058 aaKnown RBP18.31■□□□□ 0.52
SFXN1-208ENST00000507823 NOGQ13253 232 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 DCAF6Q58WW2 860 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 BHLHA9Q7RTU4 235 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 ANKMY2Q8IV38 441 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
SFXN1-208ENST00000507823 CKAP2Q8WWK9 683 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 FAM149B1Q96BN6 582 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 SEC16BQ96JE7 1060 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 PNPLA8Q9NP80 782 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 ETNK2Q9NVF9 386 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 DTLQ9NZJ0 730 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 PSMC3IPQ9P2W1 217 aaPredicted RBP18.31■□□□□ 0.52
SFXN1-208ENST00000507823 CASTOR2A6NHX0 329 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 MYO1CO00159 1063 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 MAGEA3P43357 314 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 PITX1P78337 314 aaPredicted RBP18.31■□□□□ 0.52
SFXN1-208ENST00000507823 SP3Q02447 781 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 PPARDQ03181 441 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 ITGA7Q13683 1181 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 KLHL38Q2WGJ6 581 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 HP1BP3Q5SSJ5 553 aaPredicted RBP18.31■□□□□ 0.52
SFXN1-208ENST00000507823 ADGRD1Q6QNK2 874 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 FAM131BQ86XD5 332 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 SMARCD1Q96GM5 515 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 ULBP1Q9BZM6 244 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 SSU72Q9NP77 194 aaKnown RBP18.31■□□□□ 0.52
SFXN1-208ENST00000507823 RAB6BQ9NRW1 208 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 RRN3Q9NYV6 651 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 TBK1Q9UHD2 729 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 DSEQ9UL01 958 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 PTPRDP23468 1912 aa18.31■□□□□ 0.52
SFXN1-208ENST00000507823 PATJQ8NI35 1801 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 RASA4BC9J798 803 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 RASA4O43374 803 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 ARL4AP40617 200 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 TUSC3Q13454 348 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 TMED2Q15363 201 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 SYPL2Q5VXT5 272 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 HFE2Q6ZVN8 426 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 BZW1Q7L1Q6 419 aaKnown RBP18.3■□□□□ 0.52
SFXN1-208ENST00000507823 KLC2Q9H0B6 622 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 ARHGEF4Q9NR80 690 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 FOXO6A8MYZ6 492 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 GOT1P17174 413 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 TPSB2P20231 275 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 SSTR1P30872 391 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 TPSAB1Q15661 275 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 GKAP1Q5VSY0 366 aaPredicted RBP18.3■□□□□ 0.52
SFXN1-208ENST00000507823 C3orf62Q6ZUJ4 267 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 SRRM1Q8IYB3 904 aaKnown RBP18.3■□□□□ 0.52
SFXN1-208ENST00000507823 DENND1AQ8TEH3 1009 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 IRGQQ8WZA9 623 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 SGSM3Q96HU1 749 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 ADAM2Q99965 735 aa18.3■□□□□ 0.52
SFXN1-208ENST00000507823 WDR6Q9NNW5 1121 aaKnown RBP18.3■□□□□ 0.52
SFXN1-208ENST00000507823 TIMM13Q9Y5L4 95 aaPredicted RBP18.3■□□□□ 0.52
SFXN1-208ENST00000507823 ELNP15502 786 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 AMPD1P23109 780 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 CACNA2D1P54289 1103 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 SEMA3BQ13214 749 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 BBS9Q3SYG4 887 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 TRAF7Q6Q0C0 670 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 KCNT2Q6UVM3 1135 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 ARHGEF18Q6ZSZ5 1173 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 GPRIN1Q7Z2K8 1008 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 CPLX4Q7Z7G2 160 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 ECHDC2Q86YB7 292 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 IGDCC3Q8IVU1 814 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 LRRC34Q8IZ02 419 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 PYROXD2Q8N2H3 581 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 SMC1BQ8NDV3 1235 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 MZB1Q8WU39 189 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 SRRDQ9UH36 339 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 PCNTO95613 3336 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 NLRC5Q86WI3 1866 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 H3BRJ5 948 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 M0QYT0 321 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 DPYSQ14117 519 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 PAFAH1B3Q15102 231 aaKnown RBP18.29■□□□□ 0.52
SFXN1-208ENST00000507823 INTS6LQ5JSJ4 861 aaKnown RBP18.29■□□□□ 0.52
SFXN1-208ENST00000507823 PM20D1Q6GTS8 502 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 AGGF1Q8N302 714 aaeCLIP18.29■□□□□ 0.529e-7■■■□□ 14.8
SFXN1-208ENST00000507823 RNF139Q8WU17 664 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 LRRC39Q96DD0 335 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 PIGVQ9NUD9 493 aa18.29■□□□□ 0.52
SFXN1-208ENST00000507823 FAM47DPA6NHR8 397 aa18.28■□□□□ 0.52
SFXN1-208ENST00000507823 YJEFN3A6XGL0 299 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms