RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 KLKB1P03952 638 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CFIP05156 583 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CISD3P0C7P0 127 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 ENGP17813 658 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CSRP1P21291 193 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CORO1AP31146 461 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 DPP6P42658 865 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 PNOCQ13519 176 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 DCAF17Q5H9S7 520 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 SPDYCQ5MJ68 293 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 PIGZQ86VD9 579 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 TTC39CQ8N584 583 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 TATDN2Q93075 761 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 TMEM176AQ96HP8 235 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 FAXDC2Q96IV6 333 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CDK5RAP1Q96SZ6 601 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC6A17Q9H1V8 727 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CD248Q9HCU0 757 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CACNA2D2Q9NY47 1150 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 PILRBQ9UKJ0 227 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 CYP8B1Q9UNU6 501 aa12.12□□□□□ -0.47
HMGCS1-204ENST00000507293 PENKP01210 267 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 PRCPP42785 496 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 COG7P83436 770 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 ZNF33AQ06730 810 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 FOXC1Q12948 553 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 CBWD6Q4V339 395 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 CBWD3Q5JTY5 395 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 CBWD5Q5RIA9 395 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 TCERG1LQ5VWI1 586 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 ARHGAP17Q68EM7 881 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC23A3Q6PIS1 610 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 KIAA1324Q6UXG2 1013 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 ARHGAP18Q8N392 663 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 DEFB124Q8NES8 71 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 CD93Q9NPY3 652 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 FBXO10Q9UK96 956 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 STRIP2Q9ULQ0 834 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 ZNF510Q9Y2H8 683 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 STON1Q9Y6Q2 735 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 CHD8Q9HCK8 2581 aa12.11□□□□□ -0.47
HMGCS1-204ENST00000507293 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC12A8A0AV02 714 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 WASH3PC4AMC7 463 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 TULP2O00295 520 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 GFRA2O00451 464 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC16A3O15427 465 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 ZNF217O75362 1048 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 CEACAM1P13688 526 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 HOXD12P35452 270 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 CHKAP35790 457 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 TKTL1P51854 596 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 MFAP3P55082 362 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC8A3P57103 927 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 GEN1Q17RS7 908 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 DUOXA1Q1HG43 343 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 RAB41Q5JT25 222 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 ZNF658Q5TYW1 1059 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 DENND1CQ8IV53 801 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC41A1Q8IVJ1 513 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 TRIML1Q8N9V2 468 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 MRGPRX1Q96LB2 322 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 HSPA12BQ96MM6 686 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 TSG101Q99816 390 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 GTPBP2Q9BX10 602 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 ULBP1Q9BZM6 244 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 DCLK3Q9C098 648 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 FAM124BQ9H5Z6 455 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 MARCH2Q9P0N8 246 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 AGO1Q9UL18 857 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 SLC27A6Q9Y2P4 619 aa12.1□□□□□ -0.47
HMGCS1-204ENST00000507293 TRIM49BA6NDI0 452 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 NDUFS2O75306 463 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 CYBBP04839 570 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 ATXN3P54252 364 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 PMS1P54277 932 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 BCAT1P54687 386 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 PDE4CQ08493 712 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 CUL2Q13617 745 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 STARD3Q14849 445 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 ANKRD40Q6AI12 368 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 BHLHA9Q7RTU4 235 aa12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 ZC3H3Q8IXZ2 948 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-204ENST00000507293 CPXM2Q8N436 756 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms