RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 ADAMTS3O15072 1205 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 TGFB1I1O43294 461 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 RGS20O76081 388 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 CST5P28325 142 aaPredicted RBP9.76□□□□□ -0.85
NEK1-203ENST00000507142 ARHGAP25P42331 645 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 NFIL3Q16649 462 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 DOK6Q6PKX4 331 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 ZNF576Q9H609 170 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 POLMQ9NP87 494 aaPredicted RBP9.76□□□□□ -0.85
NEK1-203ENST00000507142 OGDHLQ9ULD0 1010 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 L1RE1Q9UN81 338 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 PTPRJQ12913 1337 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 CORO1AP31146 461 aaKnown RBP9.76□□□□□ -0.85
NEK1-203ENST00000507142 PFKPQ01813 784 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 AHCYL2Q96HN2 611 aaKnown RBP9.76□□□□□ -0.85
NEK1-203ENST00000507142 RILPQ96NA2 401 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 DUSP9Q99956 384 aaKnown RBP9.76□□□□□ -0.85
NEK1-203ENST00000507142 MYOCQ99972 504 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 ERVK-5Q9HDB9 667 aa9.76□□□□□ -0.85
NEK1-203ENST00000507142 RBM22Q9NW64 420 aaKnown RBP eCLIP9.76□□□□□ -0.85
NEK1-203ENST00000507142 CYP2A6P11509 494 aaPredicted RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 TAC1P20366 129 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 DEFB103AP81534 67 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 MPPE1Q53F39 396 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 CEP85LQ5SZL2 805 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 NAPEPLDQ6IQ20 393 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 CCDC137Q6PK04 289 aaKnown RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3DA0A087WVF3 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3IA0A087WXS9 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3EA0A087X179 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3KA0A087X1G2 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 EXOC1LA0A1B0GW35 172 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3FA6NER0 549 aaPredicted RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 A8MX80 341 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3LB9A6J9 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 EPHX1P07099 455 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3HP0C7X1 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3GQ6DHY5 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3CQ6IPX1 549 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 SH3RF1Q7Z6J0 888 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TBC1D3Q8IZP1 549 aaPredicted RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 KAT2BQ92831 832 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 ELAC1Q9H777 363 aaKnown RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 ARHGEF4Q9NR80 690 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 DNAJB4Q9UDY4 337 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 GZMAP12544 262 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 STX2P32856 288 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 PPP3CCP48454 512 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 SNRPD1P62314 119 aaKnown RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 MRPS25P82663 173 aaKnown RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 GAD2Q05329 585 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 MTF1Q14872 753 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 FAM183BPQ6ZVS7 135 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 OR8D1Q8WZ84 308 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 PCED1BQ96HM7 432 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 SRPK1Q96SB4 655 aaKnown RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 SFXN1Q9H9B4 322 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 CNGB3Q9NQW8 809 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 PDLIM7Q9NR12 457 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 MYBPHLA2RUH7 354 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 DGKEP52429 567 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 POLR2LP62875 67 aaKnown RBP9.75□□□□□ -0.85
NEK1-203ENST00000507142 IRX4P78413 519 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 TCEA2Q15560 299 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 CLEC17AQ6ZS10 378 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 ZNF280BQ86YH2 543 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 MCOLN2Q8IZK6 566 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 ATXN7L3BQ96GX2 97 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 LPIN3Q9BQK8 851 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 NID2Q14112 1375 aa9.75□□□□□ -0.85
NEK1-203ENST00000507142 PDZK1P1A8MUH7 402 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 GPC4O75487 556 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 CST3P01034 146 aaPredicted RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 SERPINF2P08697 491 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 MRPS5P82675 430 aaKnown RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 CBX2Q14781 532 aaPredicted RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 TSTD1Q8NFU3 115 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 DRC3Q9H069 523 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 VPS11Q9H270 941 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 KIAA1522Q9P206 1035 aaPredicted RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 TBK1Q9UHD2 729 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 PRPF4O43172 522 aaKnown RBP eCLIP9.74□□□□□ -0.85
NEK1-203ENST00000507142 KLRC4O43908 158 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 GYPCP04921 128 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 PLEKP08567 350 aaPredicted RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 SERPINA4P29622 427 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 CHRNA3P32297 505 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 PDIA2Q13087 525 aaKnown RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 BMT2Q1RMZ1 405 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 TRMT11Q7Z4G4 463 aaKnown RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 FAM71DQ8N9W8 422 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 TM6SF2Q9BZW4 377 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 OR12D3Q9UGF7 316 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 CD207Q9UJ71 328 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 RBM47A0AV96 593 aaKnown RBP9.74□□□□□ -0.85
NEK1-203ENST00000507142 ZBTB22O15209 634 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 ADAMTS4O75173 837 aa9.74□□□□□ -0.85
NEK1-203ENST00000507142 GGCXP38435 758 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms