RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 LRRC52Q8N7C0 313 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 C12orf50Q8NA57 414 aaPredicted RBP6.92□□□□□ -1.3
NEDD4-206ENST00000507063 CACTINQ8WUQ7 758 aaKnown RBP6.92□□□□□ -1.3
NEDD4-206ENST00000507063 LEO1Q8WVC0 666 aaPredicted RBP6.92□□□□□ -1.3
NEDD4-206ENST00000507063 RLN3Q8WXF3 142 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 FOXD4L4Q8WXT5 416 aaPredicted RBP6.92□□□□□ -1.3
NEDD4-206ENST00000507063 HVCN1Q96D96 273 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 TRMT2BQ96GJ1 504 aaKnown RBP6.92□□□□□ -1.3
NEDD4-206ENST00000507063 PCED1BQ96HM7 432 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 SYT15Q9BQS2 421 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 ABCB6Q9NP58 842 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 OLFML3Q9NRN5 406 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 STIM2Q9P246 746 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
NEDD4-206ENST00000507063 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 ITGA11Q9UKX5 1188 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 RALGAPA1Q6GYQ0 2036 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 MAP1BP46821 2468 aaKnown RBP6.92□□□□□ -1.3
NEDD4-206ENST00000507063 CEP295Q9C0D2 2601 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 MYO16Q9Y6X6 1858 aa6.92□□□□□ -1.3
NEDD4-206ENST00000507063 CCDC163A0A0D9SF12 145 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 BCLAF3A2AJT9 711 aaKnown RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ZNF840PA6NDX5 716 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 F8VP50 259 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 SGK1O00141 431 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 TRIM24O15164 1050 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ATG13O75143 517 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 CAVIN2O95810 425 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 BMP15O95972 392 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 LDHAP00338 332 aaKnown RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ABL1P00519 1130 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 CYP17A1P05093 508 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 RARAP10276 462 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 DLATP10515 647 aaKnown RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 STAT6P42226 847 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 IFNAR2P48551 515 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 LHX1P48742 406 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 POU5F1Q01860 360 aaKnown RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 TAF10Q12962 218 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 SLC39A14Q15043 492 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 MDH1BQ5I0G3 518 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 PERM1Q5SV97 790 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ANO7Q6IWH7 933 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 RHBDF2Q6PJF5 856 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ARMCX6Q7L4S7 300 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 SYT13Q7L8C5 426 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 HS2ST1Q7LGA3 356 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 TRAPPC11Q7Z392 1133 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 NELFCDQ8IXH7 590 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 TMEM86AQ8N2M4 240 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 CPA6Q8N4T0 437 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 DEFB119Q8N690 84 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ALLCQ8N6M5 410 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 NAT16Q8N8M0 369 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 MYCBPAPQ8TBZ2 947 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 PLEKHO2Q8TD55 490 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 USP33Q8TEY7 942 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ATP2A3Q93084 1043 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 CCDC127Q96BQ5 260 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ANKRD36BP1Q96IX9 119 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 LOXL4Q96JB6 756 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 KCNK16Q96T55 309 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 MMS19Q96T76 1030 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 LSM14BQ9BX40 385 aaKnown RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 B3GNT5Q9BYG0 378 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 TRIM9Q9C026 710 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ZNF518BQ9C0D4 1074 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 KIF9Q9HAQ2 790 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 FSCN3Q9NQT6 498 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 TMEM74BQ9NUR3 256 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 HSPBP1Q9NZL4 362 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 UXTQ9UBK9 157 aaPredicted RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 SEL1LQ9UBV2 794 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 CHORDC1Q9UHD1 332 aaPredicted RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 MBD1Q9UIS9 605 aaPredicted RBP6.91□□□□□ -1.3
NEDD4-206ENST00000507063 EXOC7Q9UPT5 735 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 MTMR6Q9Y217 621 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 CPQQ9Y646 472 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 ANAPC1Q9H1A4 1944 aa6.91□□□□□ -1.3
NEDD4-206ENST00000507063 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 GREB1Q4ZG55 1949 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 ZNF638Q14966 1978 aaKnown RBP6.9□□□□□ -1.3
NEDD4-206ENST00000507063 LNP1A1A4G5 178 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 ZNF233A6NK53 670 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 CDX4O14627 284 aaPredicted RBP6.9□□□□□ -1.3
NEDD4-206ENST00000507063 MMP20O60882 483 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 APBB3O95704 486 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 C1QTNF9P0C862 333 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 PTPN1P18031 435 aaKnown RBP6.9□□□□□ -1.3
NEDD4-206ENST00000507063 WARSP23381 471 aaKnown RBP6.9□□□□□ -1.3
NEDD4-206ENST00000507063 PCSK1P29120 753 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 GBP1P32455 592 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 ABCD1P33897 745 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 GNL1P36915 607 aaPredicted RBP6.9□□□□□ -1.3
NEDD4-206ENST00000507063 MAGEA11P43364 429 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 CYP2J2P51589 502 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 LIMK1P53667 647 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 MYL6P60660 151 aa6.9□□□□□ -1.3
NEDD4-206ENST00000507063 IRX4P78413 519 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms