RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 HBS1LQ9Y450 684 aaKnown RBP15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 DCHS1Q96JQ0 3298 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 DCLK1O15075 740 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 AP5Z1O43299 807 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 GDF9O60383 454 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 ADAM23O75077 832 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 LATS1O95835 1130 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 PENKP01210 267 aaPredicted RBP15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 HNRNPLP14866 589 aaKnown RBP eCLIP15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 CD19P15391 556 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 EFEMP1Q12805 493 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 LMAN2Q12907 356 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 EIF4HQ15056 248 aaKnown RBP15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 GOLGA7BQ2TAP0 167 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 EMC10Q5UCC4 262 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 SIX6OS1Q8N1H7 587 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 ZNF557Q8N988 423 aaPredicted RBP15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 HMGB4Q8WW32 186 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 FAM81BQ96LP2 452 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 ARID3AQ99856 593 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 GABRG3Q99928 467 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 EDEM2Q9BV94 578 aa15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 CIZ1Q9ULV3 898 aaPredicted RBP15.12■□□□□ 0.01
HMGCS1-203ENST00000507004 TIMM44O43615 452 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 CORO1AP31146 461 aaKnown RBP15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 DHPSP49366 369 aaPredicted RBP15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 HARS2P49590 506 aaKnown RBP15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 PMS1P54277 932 aaKnown RBP15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 PDE4CQ08493 712 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 MESP2Q0VG99 397 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 STARD3Q14849 445 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 MAP7D1Q3KQU3 841 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 LCLAT1Q6UWP7 414 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 SYT12Q8IV01 421 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 TRIML1Q8N9V2 468 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 CEP76Q8TAP6 659 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 IRGQQ8WZA9 623 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 GOLGA1Q92805 767 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 WBP2Q969T9 261 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 ABCC13Q9NSE7 274 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 NUDT5Q9UKK9 219 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 MAN1B1Q9UKM7 699 aa15.11■□□□□ 0.01
HMGCS1-203ENST00000507004 ABCA7Q8IZY2 2146 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 SLC12A8A0AV02 714 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 TRIM49BA6NDI0 452 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 O00370 1275 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 TM4SF5O14894 197 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 MDM4O15151 490 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 CISD3P0C7P0 127 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 MARSP56192 900 aaKnown RBP15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 GCNT1Q02742 428 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 CNGA2Q16280 664 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 LYSMD4Q5XG99 296 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 TTI2Q6NXR4 508 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 FAM217AQ8IXS0 508 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 UBR7Q8N806 425 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 IPO4Q8TEX9 1081 aaKnown RBP15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 HSFY1Q96LI6 401 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 TRIM62Q9BVG3 475 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 LSM14BQ9BX40 385 aaKnown RBP15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 NUSAP1Q9BXS6 441 aaKnown RBP15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 ULBP1Q9BZM6 244 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 TMEM9BQ9NQ34 198 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 THADAQ6YHU6 1953 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 NCOR2Q9Y618 2525 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 CNOT1A5YKK6 2376 aaKnown RBP15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 SPTBN2O15020 2390 aa15.1■□□□□ 0.01
HMGCS1-203ENST00000507004 PLXND1Q9Y4D7 1925 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 SART1O43290 800 aaKnown RBP15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 FBXO21O94952 628 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 KLKB1P03952 638 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 GABRG2P18507 467 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 BCKDHBP21953 392 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 PAK1Q13153 545 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 TRIP4Q15650 581 aaPredicted RBP15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 CCDC6Q16204 474 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 MEA1Q16626 185 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 MPPE1Q53F39 396 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 FYB2Q5VWT5 728 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 EGFLAMQ63HQ2 1017 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 TMEM270Q6UE05 265 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 ANKS1BQ7Z6G8 1248 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 METTL3Q86U44 580 aaKnown RBP15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 SFTPA1Q8IWL2 248 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 NELFBQ8WX92 580 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 PIGKQ92643 395 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 AGO1Q9UL18 857 aaKnown RBP15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 INVSQ9Y283 1065 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 PCDHB4Q9Y5E5 795 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 NUP205Q92621 2012 aa15.09■□□□□ 0.01
HMGCS1-203ENST00000507004 A0A1W2PQF6 199 aa15.08■□□□□ 0
HMGCS1-203ENST00000507004 PRRT4C9JH25 899 aa15.08■□□□□ 0
HMGCS1-203ENST00000507004 MFAP3P55082 362 aa15.08■□□□□ 0
HMGCS1-203ENST00000507004 ADIGQ0VDE8 80 aa15.08■□□□□ 0
HMGCS1-203ENST00000507004 LRMPQ12912 555 aa15.08■□□□□ 0
HMGCS1-203ENST00000507004 MORC3Q14149 939 aa15.08■□□□□ 0
HMGCS1-203ENST00000507004 PKDCCQ504Y2 493 aa15.08■□□□□ 0
HMGCS1-203ENST00000507004 PEAR1Q5VY43 1037 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms