RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PRSS33Q8NF86 280 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 TSPY26PQ9H489 355 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 LMAN1LQ9HAT1 526 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 SPATA6Q9NWH7 488 aaPredicted RBP17.43■□□□□ 0.38
SNCA-209ENST00000506244 ASNSD1Q9NWL6 643 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 TEX33O43247 280 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 LAMTOR5O43504 91 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 HSF2BPO75031 334 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 LATS1O95835 1130 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 HMBSP08397 361 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 ZNF445P59923 1031 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 YWHAZP63104 245 aaKnown RBP17.42■□□□□ 0.38
SNCA-209ENST00000506244 FANCCQ00597 558 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 ANGPT1Q15389 498 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 TRIP4Q15650 581 aaPredicted RBP17.42■□□□□ 0.38
SNCA-209ENST00000506244 NUGGCQ68CJ6 796 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 RHBDF2Q6PJF5 856 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 LRSAM1Q6UWE0 723 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 WDTC1Q8N5D0 677 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 DDX1Q92499 740 aaKnown RBP17.42■□□□□ 0.38
SNCA-209ENST00000506244 CHFRQ96EP1 664 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 MARK1Q9P0L2 795 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 WDR35Q9P2L0 1181 aa17.42■□□□□ 0.38
SNCA-209ENST00000506244 NOCTQ9UK39 431 aaKnown RBP17.42■□□□□ 0.38
SNCA-209ENST00000506244 FERP16591 822 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 CCR3P51677 355 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 RING1Q06587 406 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 FZD5Q13467 585 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 ANO4Q32M45 955 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 PTPN20Q4JDL3 420 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 FSTL4Q6MZW2 842 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 NUDT18Q6ZVK8 323 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 UNC45BQ8IWX7 931 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 DQX1Q8TE96 717 aaKnown RBP17.41■□□□□ 0.38
SNCA-209ENST00000506244 WBP2Q969T9 261 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 IQCDQ96DY2 449 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 XPO6Q96QU8 1125 aaKnown RBP17.41■□□□□ 0.38
SNCA-209ENST00000506244 SFMBT1Q9UHJ3 866 aa17.41■□□□□ 0.38
SNCA-209ENST00000506244 MSI1O43347 362 aaKnown RBP17.4■□□□□ 0.38
SNCA-209ENST00000506244 ERBB2P04626 1255 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 CYBBP04839 570 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 MMEP08473 750 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 SCNN1AP37088 669 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 OPRD1P41143 372 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 GALK1P51570 392 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 UBASH3AP57075 661 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 NOMO3P69849 1222 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 TCF15Q12870 199 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 OR6B2Q6IFH4 312 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 OLFML1Q6UWY5 402 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 MAMSTRQ6ZN01 415 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 FAM183BPQ6ZVS7 135 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 SLC26A9Q7LBE3 791 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 ERICH1Q86X53 443 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 DENND1CQ8IV53 801 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 CPXM2Q8N436 756 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 SPEM1Q8N4L4 309 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 PNKPQ96T60 521 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 BBS2Q9BXC9 721 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 RAPGEFL1Q9UHV5 662 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 FBXO4Q9UKT5 387 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 AGO1Q9UL18 857 aaKnown RBP17.4■□□□□ 0.38
SNCA-209ENST00000506244 TLR6Q9Y2C9 796 aa17.4■□□□□ 0.38
SNCA-209ENST00000506244 NEDD8-MDP1E9PL57 170 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 ATG13O75143 517 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 DAB1O75553 588 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 IGLV3-27P01718 113 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 APODP05090 189 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 GABRB2P47870 512 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 SLC11A2P49281 568 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 TBX4P57082 545 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 SLC6A3Q01959 620 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 ARID5AQ03989 594 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 MTAPQ13126 283 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 NR1I3Q14994 352 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 GAB4Q2WGN9 574 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 NAA35Q5VZE5 725 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.37
SNCA-209ENST00000506244 SLC20A1Q8WUM9 679 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 ACDQ96AP0 544 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 C18orf8Q96DM3 657 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 NAP1L5Q96NT1 182 aaPredicted RBP17.39■□□□□ 0.37
SNCA-209ENST00000506244 SLC2A13Q96QE2 648 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 NUP58Q9BVL2 599 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 EDEM3Q9BZQ6 932 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
SNCA-209ENST00000506244 RBM12Q9NTZ6 932 aaKnown RBP17.39■□□□□ 0.37
SNCA-209ENST00000506244 TMEM51Q9NW97 253 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 RRN3Q9NYV6 651 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 TJP2Q9UDY2 1190 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 NAALADL1Q9UQQ1 740 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 KIAA1549LQ6ZVL6 1849 aa17.39■□□□□ 0.37
SNCA-209ENST00000506244 CACNG3O60359 315 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 EGFP01133 1207 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 APOEP02649 317 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 KLKB1P03952 638 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 TYRP14679 529 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 GBP1P32455 592 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 GRIA2P42262 883 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 NSFP46459 744 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms