RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PCDHGA1Q9Y5H4 931 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 PCDHA5Q9Y5H7 936 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 MYOFQ9NZM1 2061 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 PCDH15Q96QU1 1955 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 ZFYVE26Q68DK2 2539 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 UBE4BO95155 1302 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 DSPP15924 2871 aaKnown RBP10.43□□□□□ -0.74
NEDD9-210ENST00000505589 PCDHGA12O60330 932 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 FAM200BP0CF97 657 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 JUPP14923 745 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 GRIA4P48058 902 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 CASP5P51878 434 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 CACNA2D1P54289 1103 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 ZNF445P59923 1031 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 GRIN1Q05586 938 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 ENPP2Q13822 863 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 FUT11Q495W5 492 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 ADAT2Q7Z6V5 191 aaKnown RBP10.43□□□□□ -0.74
NEDD9-210ENST00000505589 ZNF605Q86T29 641 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 FAM35AQ86V20 835 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 BTBD1Q9H0C5 482 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 DPEP3Q9H4B8 488 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 ELOVL2Q9NXB9 296 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 CLIC5Q9NZA1 410 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 GMIPQ9P107 970 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 HCN2Q9UL51 889 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 TPX2Q9ULW0 747 aaKnown RBP10.43□□□□□ -0.74
NEDD9-210ENST00000505589 SCML1Q9UN30 329 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 RAD54BQ9Y620 910 aa10.43□□□□□ -0.74
NEDD9-210ENST00000505589 MORC2Q9Y6X9 1032 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-210ENST00000505589 PTPRJQ12913 1337 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 WASH3PC4AMC7 463 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 TRIM24O15164 1050 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 YKT6O15498 198 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 EPHX1P07099 455 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 ATXN1LP0C7T5 689 aaKnown RBP10.42□□□□□ -0.74
NEDD9-210ENST00000505589 RARGP13631 454 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 CCT8P50990 548 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 BCAT1P54687 386 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 MAP3K7CLP57077 242 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 MYL6P60660 151 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 CYP24A1Q07973 514 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 BIRC3Q13489 604 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 ZNF699Q32M78 642 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 C10orf120Q5SQS8 335 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 USP49Q70CQ1 688 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 ANKS1BQ7Z6G8 1248 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 ARHGAP18Q8N392 663 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 ZNF557Q8N988 423 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-210ENST00000505589 OR2T3Q8NH03 318 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 GOLGA1Q92805 767 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 NXPE2Q96DL1 559 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 MKRN2Q9H000 416 aaKnown RBP10.42□□□□□ -0.74
NEDD9-210ENST00000505589 SGK2Q9HBY8 427 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 SUN2Q9UH99 717 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 STRIP2Q9ULQ0 834 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 NCKAP1Q9Y2A7 1128 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 ANKRD6Q9Y2G4 727 aa10.42□□□□□ -0.74
NEDD9-210ENST00000505589 AKAP13Q12802 2813 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 TEX51A0A1B0GUA7 166 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 GOLGA8CPA6NN73 597 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 PAPSS1O43252 624 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 GREM1O60565 184 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 EXOC3O60645 756 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 TBX18O95935 607 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 PENKP01210 267 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 DNTTP04053 509 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 CD27P26842 260 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 IL12RB1P42701 662 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 CSNK1EP49674 416 aaKnown RBP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 MFAP3P55082 362 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 C21orf59P57076 290 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 SLC8A3P57103 927 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 CAMK2BQ13554 666 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 NCOA4Q13772 614 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 TTC31Q49AM3 519 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 SCARA3Q6AZY7 606 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 SERPINA13PQ6UXR4 307 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 PAQR9Q6ZVX9 377 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 ACOT1Q86TX2 421 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 C12orf56Q8IXR9 622 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 FUKQ8N0W3 1084 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 TTC39CQ8N584 583 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 IQUBQ8NA54 791 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 CCDC150Q8NCX0 1101 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 SNX19Q92543 992 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 PANK2Q9BZ23 570 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 IMPG2Q9BZV3 1241 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 CIPCQ9C0C6 399 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 XYLT2Q9H1B5 865 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 AGPAT3Q9NRZ7 376 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 TOR4AQ9NXH8 423 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 TFIP11Q9UBB9 837 aaKnown RBP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 FTSJ1Q9UET6 329 aa10.41□□□□□ -0.74
NEDD9-210ENST00000505589 FBXO2Q9UK22 296 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.41□□□□□ -0.74
NEDD9-210ENST00000505589 FNDC3AQ9Y2H6 1198 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms