RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 ATG2BQ96BY7 2078 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 LNP1A1A4G5 178 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 SOBPA7XYQ1 873 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 PLEKP08567 350 aaPredicted RBP16.53■□□□□ 0.24
PDCD6-203ENST00000505526 GBP1P32455 592 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 ZNF252P-AS1Q0IIN9 211 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 MON1AQ86VX9 555 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 DCP1BQ8IZD4 617 aaKnown RBP16.53■□□□□ 0.24
PDCD6-203ENST00000505526 CPA6Q8N4T0 437 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 KDF1Q8NAX2 398 aaPredicted RBP16.53■□□□□ 0.24
PDCD6-203ENST00000505526 ZNF606Q8WXB4 792 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 MRPS31Q92665 395 aaKnown RBP16.53■□□□□ 0.24
PDCD6-203ENST00000505526 EZH1Q92800 747 aaPredicted RBP16.53■□□□□ 0.24
PDCD6-203ENST00000505526 PKMYT1Q99640 499 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 CHP1Q99653 195 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 ECT2Q9H8V3 914 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 MAGED2Q9UNF1 606 aaPredicted RBP16.53■□□□□ 0.24
PDCD6-203ENST00000505526 BZW2Q9Y6E2 419 aaKnown RBP16.53■□□□□ 0.24
PDCD6-203ENST00000505526 BAHCC1Q9P281 2608 aa16.53■□□□□ 0.24
PDCD6-203ENST00000505526 CCDC130P13994 396 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 SPINK2P20155 84 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 DGKEP52429 567 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 COL9A2Q14055 689 aaPredicted RBP16.52■□□□□ 0.23
PDCD6-203ENST00000505526 ZNF268Q14587 947 aaPredicted RBP16.52■□□□□ 0.23
PDCD6-203ENST00000505526 PPP1R26Q5T8A7 1209 aaPredicted RBP16.52■□□□□ 0.23
PDCD6-203ENST00000505526 FAM171BQ6P995 826 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 ZNF571Q7Z3V5 609 aaPredicted RBP16.52■□□□□ 0.23
PDCD6-203ENST00000505526 LRRC8AQ8IWT6 810 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 STKLD1Q8NE28 680 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 MYCBPAPQ8TBZ2 947 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 CD101Q93033 1021 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 MYLPFQ96A32 169 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 ACDQ96AP0 544 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 CYFIP2Q96F07 1278 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 PCED1BQ96HM7 432 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 BAG1Q99933 345 aaPredicted RBP16.52■□□□□ 0.23
PDCD6-203ENST00000505526 AGPAT1Q99943 283 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 TMLHEQ9NVH6 421 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 WASF3Q9UPY6 502 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 INVSQ9Y283 1065 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 PCDHB5Q9Y5E4 795 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 ATRXP46100 2492 aa16.52■□□□□ 0.23
PDCD6-203ENST00000505526 O00370 1275 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 KHNYNO15037 678 aaKnown RBP16.51■□□□□ 0.23
PDCD6-203ENST00000505526 MED7O43513 233 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 MMEP08473 750 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 CSH1P0DML2 217 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 CSH2P0DML3 217 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 CHRNB2P17787 502 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 FECHP22830 423 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 GPR15P49685 360 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 CDK17Q00537 523 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 CDR2Q01850 454 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 CYP27A1Q02318 531 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 MTF1Q14872 753 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 MAPRE1Q15691 268 aaKnown RBP16.51■□□□□ 0.23
PDCD6-203ENST00000505526 ZNF677Q86XU0 584 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 SLC2A14Q8TDB8 520 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 MED10Q9BTT4 135 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 DUS2Q9NX74 493 aaKnown RBP16.51■□□□□ 0.23
PDCD6-203ENST00000505526 DENND4CQ5VZ89 1909 aa16.51■□□□□ 0.23
PDCD6-203ENST00000505526 CLDN5O00501 218 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 ADORA2BP29275 332 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 EIF4A3P38919 411 aaKnown RBP16.5■□□□□ 0.23
PDCD6-203ENST00000505526 FMO1Q01740 532 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 CNGA2Q16280 664 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 GOLGA7BQ2TAP0 167 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 USP39Q53GS9 565 aaKnown RBP16.5■□□□□ 0.23
PDCD6-203ENST00000505526 ARHGAP17Q68EM7 881 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 TMEM139Q8IV31 216 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 FUKQ8N0W3 1084 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 TTC16Q8NEE8 873 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 OSCP1Q8WVF1 389 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 SYT11Q9BT88 431 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 TMEM121BQ9BXQ6 578 aaPredicted RBP16.5■□□□□ 0.23
PDCD6-203ENST00000505526 B3GNT5Q9BYG0 378 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 ADAM33Q9BZ11 813 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 PDCL3Q9H2J4 239 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 NHEJ1Q9H9Q4 299 aaPredicted RBP16.5■□□□□ 0.23
PDCD6-203ENST00000505526 TMEM9BQ9NQ34 198 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 SEPT11Q9NVA2 429 aaKnown RBP16.5■□□□□ 0.23
PDCD6-203ENST00000505526 TSPAN16Q9UKR8 245 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDCD6-203ENST00000505526 LAMA1P25391 3075 aa16.5■□□□□ 0.23
PDCD6-203ENST00000505526 TOP3BO95985 862 aaKnown RBP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 CEACAM1P13688 526 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 CSRP1P21291 193 aaKnown RBP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 TNFAIP3P21580 790 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 STILQ15468 1287 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 NFE2Q16621 373 aaPredicted RBP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 PMS2CLQ68D20 193 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 LCLAT1Q6UWP7 414 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 C4orf50Q6ZRC1 276 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 PAQR9Q6ZVX9 377 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 C11orf74Q86VG3 221 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 TMTC1Q8IUR5 882 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 SPATA2LQ8IUW3 424 aaPredicted RBP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms