RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 R3HDM2Q9Y2K5 976 aaKnown RBP14.55□□□□□ -0.08
TCOF1-207ENST00000504761 H0Y3Z8 333 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 SMAPO00193 183 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 LCA5LO95447 670 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 HOXC6P09630 235 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 OVGP1Q12889 678 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 PMF1Q6P1K2 205 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 CARNMT1Q8N4J0 409 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 DDI1Q8WTU0 396 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 SGSM3Q96HU1 749 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 RMDN2Q96LZ7 410 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 TRPV6Q9H1D0 765 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.55□□□□□ -0.08
TCOF1-207ENST00000504761 NAALADL1Q9UQQ1 740 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 COQ4Q9Y3A0 265 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 RNF103O00237 685 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 SPTLC1O15269 473 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 SPAG6O75602 509 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 MYL4P12829 197 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 LMO2P25791 158 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 ZNF844Q08AG5 666 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 POU6F1Q14863 301 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 FBXO44Q9H4M3 255 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 TLR8Q9NR97 1041 aaKnown RBP14.55□□□□□ -0.08
TCOF1-207ENST00000504761 HMGXB4Q9UGU5 601 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 KIAA0100Q14667 2235 aaKnown RBP14.54□□□□□ -0.08
TCOF1-207ENST00000504761 IKBKEQ14164 716 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 ZNF792Q3KQV3 632 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 SH2D4BQ5SQS7 431 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 SLC4A11Q8NBS3 891 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 TSSK1BQ9BXA7 367 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 CPSF2Q9P2I0 782 aaKnown RBP14.54□□□□□ -0.08
TCOF1-207ENST00000504761 GIT1Q9Y2X7 761 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-207ENST00000504761 GOLGA8TH3BQL2 631 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 GYG2O15488 501 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 ANXA9O76027 345 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 HAUS5O94927 633 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 GFAPP14136 432 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 GOT1P17174 413 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 NDUFS3O75489 264 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 LILRA4P59901 499 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 ART3Q13508 389 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 TSNAXIP1Q2TAA8 658 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 MUM1Q2TAK8 710 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 DPF3Q92784 378 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 CINPQ9BW66 212 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-207ENST00000504761 FRMD8P1Q9BZ68 369 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-207ENST00000504761 UNKQ9C0B0 810 aaKnown RBP14.54□□□□□ -0.08
TCOF1-207ENST00000504761 CDH9Q9ULB4 789 aa14.54□□□□□ -0.08
TCOF1-207ENST00000504761 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-207ENST00000504761 SLX4Q8IY92 1834 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 BANF1O75531 89 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 SCNN1BP51168 640 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 CRADDP78560 199 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 TUSC3Q13454 348 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 KIF19Q2TAC6 998 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 ASTE1Q2TB18 679 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-207ENST00000504761 FAM182AQ5T1J6 154 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 FAM35AQ86V20 835 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 LRRC34Q8IZ02 419 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 MSL3Q8N5Y2 521 aaKnown RBP14.53□□□□□ -0.08
TCOF1-207ENST00000504761 LRRC57Q8N9N7 239 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 ATAD1Q8NBU5 361 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 FICDQ9BVA6 458 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 GPR63Q9BZJ6 419 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 MAF1Q9H063 256 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 NINJ2Q9NZG7 142 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 SLC30A1Q9Y6M5 507 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 TJP1Q07157 1748 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 IGF2BP3O00425 579 aaKnown RBP eCLIP14.53□□□□□ -0.08
TCOF1-207ENST00000504761 EDIL3O43854 480 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 OR1E1P30953 314 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 AVPR1AP37288 418 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 STX3Q13277 289 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 ACAP1Q15027 740 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 ANKRD20A8PQ5CZ79 823 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 RFX8Q6ZV50 586 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 CTNNAL1Q9UBT7 734 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 VPS28Q9UK41 221 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 SHOC2Q9UQ13 582 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 LGR5O75473 907 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 DPYSL3Q14195 570 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 GRB14Q14449 540 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 SNCBQ16143 134 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 PLEKHA7Q6IQ23 1121 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 LCLAT1Q6UWP7 414 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 MON1BQ7L1V2 547 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 RNF157Q96PX1 679 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 LGMNQ99538 433 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 SHCBP1LQ9BZQ2 653 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 MARCH2Q9P0N8 246 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 PCDHB12Q9Y5F1 795 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 PPEF2O14830 753 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 PSMD3O43242 534 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 LIASO43766 372 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 DNAJC6O75061 913 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 PPFIA2O75334 1257 aa14.53□□□□□ -0.08
TCOF1-207ENST00000504761 SERPINB9P50453 376 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms