RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 COL20A1Q9P218 1284 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 GOLGA8TH3BQL2 631 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 MCF2LO15068 1137 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ADCY6O43306 1168 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 DNAJA2O60884 412 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 XRCC1P18887 633 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ABCD1P33897 745 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 RXRGP48443 463 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CSE1LP55060 971 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CD300CQ08708 224 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 OLIG2Q13516 323 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 DCTN2Q13561 401 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 C15orf59Q2T9L4 293 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 C1QTNF12Q5T7M4 302 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TTC39BQ5VTQ0 682 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 LPCAT2Q7L5N7 544 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CMC1Q7Z7K0 106 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SLC26A11Q86WA9 606 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 RAVER1Q8IY67 606 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM161BQ8NDZ6 487 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 STKLD1Q8NE28 680 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 PPWD1Q96BP3 646 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CATSPER2Q96P56 530 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 LENG8Q96PV6 779 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TARS2Q9BW92 718 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SENP6Q9GZR1 1112 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ARHGAP26Q9UNA1 814 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 PCDHGA4Q9Y5G9 962 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 MRPL42Q9Y6G3 142 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CEP350Q5VT06 3117 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ARAP2Q8WZ64 1704 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ARFGEF1Q9Y6D6 1849 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 TRIM43BA6NCK2 446 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM191CA6NGB0 347 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 PEX10O60683 326 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 CLIC3O95833 236 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ITGBL1O95965 494 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM191BP0C7N4 346 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 PTPN1P18031 435 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ITGAXP20702 1163 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 PHKA2P46019 1235 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 SERPINB8P50452 374 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 PSMC1P62191 440 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 RPS6P62753 249 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 CUL2Q13617 745 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 FLOT2Q14254 428 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 KLC3Q6P597 504 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 XKR5Q6UX68 686 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 FASTKD5Q7L8L6 764 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 CHST15Q7LFX5 561 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 GPD1LQ8N335 351 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 BHLHE22Q8NFJ8 381 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 EME1Q96AY2 570 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ALKBH8Q96BT7 664 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 MASTLQ96GX5 879 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ADA2Q9NZK5 511 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 FARP1Q9Y4F1 1045 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ATP8B3O60423 1300 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF541Q9H0D2 1346 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 J3QRK9 145 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 ZBTB14O43829 449 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 KRT3P12035 628 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 RBL1P28749 1068 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 EPHA3P29320 983 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 TFAMQ00059 246 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 SLC9A4Q6AI14 798 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 MOXD1Q6UVY6 613 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 SNX32Q86XE0 403 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 PCDH20Q8N6Y1 951 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 UBA3Q8TBC4 463 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 CNKSR2Q8WXI2 1034 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 TFAP2BQ92481 460 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 FBXL8Q96CD0 374 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 PKP2Q99959 881 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 DHX35Q9H5Z1 703 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 AVENQ9NQS1 362 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 SELENONQ9NZV5 590 aa7.87□□□□□ -1.15
NEDD9-208ENST00000504387 PAIP2BQ9ULR5 123 aaKnown RBP7.87□□□□□ -1.15
NEDD9-208ENST00000504387 P4HA2O15460 535 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 RFPL1O75677 317 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 SERPINA6P08185 405 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 NR4A1P22736 598 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 ARRB2P32121 409 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 NOVP48745 357 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 KPNA1P52294 538 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-208ENST00000504387 THOP1P52888 689 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 SLC5A3P53794 718 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 GTF2BQ00403 316 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 SLC9B1Q4ZJI4 515 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 GRAMD4Q6IC98 578 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 PLEKHA7Q6IQ23 1121 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 KRT80Q6KB66 452 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF554Q86TJ5 538 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 TRIM50Q86XT4 487 aa7.86□□□□□ -1.15
NEDD9-208ENST00000504387 CLVS1Q8IUQ0 354 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-208ENST00000504387 RELL1Q8IUW5 271 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms