RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CFAP57Q96MR6 1250 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 ZNF830Q96NB3 372 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 MCEEQ96PE7 176 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 DESI2Q9BSY9 194 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 ZFP14Q9HCL3 533 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 CALCOCO1Q9P1Z2 691 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 REXO2Q9Y3B8 237 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 ZFP37Q9Y6Q3 630 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 HELZP42694 1942 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 C5orf42Q9H799 3197 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 SIGLEC16A6NMB1 481 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 EIF3CLB5ME19 914 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 NDUFA10O95299 355 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 TRUB2O95900 331 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 PTMAP06454 111 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 PDGFRAP16234 1089 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 NOS2P35228 1153 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 SCNN1AP37088 669 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 MATKP42679 507 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 MAGEA1P43355 309 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 SULT1E1P49888 294 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 ATXN1P54253 815 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 GSCP56915 257 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 GPC5P78333 572 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 OGDHQ02218 1023 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 NME3Q13232 169 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 C15orf59Q2T9L4 293 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 SH3PXD2AQ5TCZ1 1133 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 OTUD1Q5VV17 481 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 PPP1R2P3Q6NXS1 205 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 TADA2BQ86TJ2 420 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 CCDC170Q8IYT3 715 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 ZNF276Q8N554 614 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 CELF5Q8N6W0 485 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 ZFYVE19Q96K21 471 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 BTBD6Q96KE9 485 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 TBCBQ99426 244 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 EIF3CQ99613 913 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 DDX23Q9BUQ8 820 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 SMOC2Q9H3U7 446 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 FAM204AQ9H8W3 233 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 KCNK12Q9HB15 430 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 TRPV4Q9HBA0 871 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 OLA1Q9NTK5 396 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 PARVAQ9NVD7 372 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 PRKAG3Q9UGI9 489 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 PCDHA13Q9Y5I0 950 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
PDLIM7-212ENST00000504380 A0A0U1RQJ8 604 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 ANKRD62A6NC57 917 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 RCCD1A6NED2 376 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 C2CD4BA6NLJ0 364 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 SOBPA7XYQ1 873 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 M0QYT0 321 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 STC2O76061 302 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 LCA5LO95447 670 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 CYP1A2P05177 515 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 MYBL1P10243 752 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 PFKLP17858 780 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 GPD1P21695 349 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 WEE1P30291 646 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 CCZ1BP86790 482 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 ATP11AP98196 1134 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 USP4Q13107 963 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 ZNF77Q15935 545 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 CDO1Q16878 200 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 CCDC14Q49A88 953 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 DCUN1D2Q6PH85 259 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 KLHDC10Q6PID8 442 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 MTSS1LQ765P7 747 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 BPIFB1Q8TDL5 484 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 ATRIPQ8WXE1 791 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 ELSPBP1Q96BH3 223 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 TRIM11Q96F44 468 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 CDK5RAP1Q96SZ6 601 aaKnown RBP13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 NPY6RQ99463 290 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 NUP85Q9BW27 656 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 LINC00597Q9H2U6 94 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 DDIT4Q9NX09 232 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 ZMYM5Q9UJ78 669 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 WNT6Q9Y6F9 365 aa13.83□□□□□ -0.2
PDLIM7-212ENST00000504380 NARSO43776 548 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 ECI2O75521 394 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 IGLV3-25P01717 112 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 KLKB1P03952 638 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 TMEM253P0C7T8 217 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 TBX4P57082 545 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 ZNF252P-AS1Q0IIN9 211 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 SPA17Q15506 151 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 TRIP4Q15650 581 aaPredicted RBP13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 ZC3H12AQ5D1E8 599 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 TRIM68Q6AZZ1 485 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms