RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LRPAP1P30533 357 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 LIG4P49917 911 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 EFNA5P52803 228 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 LILRA4P59901 499 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 CXADRP78310 365 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 BNC1Q01954 994 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 CCDC173Q0VFZ6 552 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 STRN3Q13033 797 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 LY6DQ14210 128 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 TMEM132DQ14C87 1099 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 SETDB1Q15047 1291 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 TAF1BQ53T94 588 aaPredicted RBP3.89□□□□□ -1.79
USP46-205ENST00000504078 C10orf76Q5T2E6 689 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 PEAR1Q5VY43 1037 aaPredicted RBP3.89□□□□□ -1.79
USP46-205ENST00000504078 C9orf57Q5W0N0 161 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 GALNT17Q6IS24 598 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 CPLX2Q6PUV4 134 aaKnown RBP3.89□□□□□ -1.79
USP46-205ENST00000504078 PCSK4Q6UW60 755 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 ACAD11Q709F0 780 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 FAM124AQ86V42 546 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 MON1AQ86VX9 555 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 ZNF513Q8N8E2 541 aaPredicted RBP3.89□□□□□ -1.79
USP46-205ENST00000504078 FAM181AQ8N9Y4 354 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 SPATA18Q8TC71 538 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 KIFAP3Q92845 792 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 WBP2Q969T9 261 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 MYLPFQ96A32 169 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 MYRFLQ96LU7 910 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 NSUN5Q96P11 429 aaKnown RBP3.89□□□□□ -1.79
USP46-205ENST00000504078 MTMR9Q96QG7 549 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 NAP1L4Q99733 375 aaKnown RBP3.89□□□□□ -1.79
USP46-205ENST00000504078 BRMS1Q9HCU9 246 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 CFAP97Q9P2B7 532 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 CCDC39Q9UFE4 941 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 PCDHB5Q9Y5E4 795 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 CPQQ9Y646 472 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 ANKRD11Q6UB99 2663 aaPredicted RBP3.89□□□□□ -1.79
USP46-205ENST00000504078 ANAPC1Q9H1A4 1944 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 IGSF10Q6WRI0 2623 aa3.89□□□□□ -1.79
USP46-205ENST00000504078 A0A087WV48 116 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 FAM221BA6H8Z2 402 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 UPK3BL1B0FP48 263 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 UPK3BL2E5RIL1 263 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 HNRNPDLO14979 420 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 CLDN3O15551 220 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 SART1O43290 800 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 EIF5BO60841 1220 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 CBFA2T3O75081 653 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 NDUFS2O75306 463 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TOM1L1O75674 476 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 CDKL5O76039 1030 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 SYPP08247 313 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 CSH1P0DML2 217 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 CSH2P0DML3 217 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 FDPSP14324 419 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 XBP1P17861 261 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TYMPP19971 482 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 DDX6P26196 483 aaKnown RBP eCLIP3.88□□□□□ -1.79
USP46-205ENST00000504078 RPA1P27694 616 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 GRNP28799 593 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 POLR2BP30876 1174 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 DDIT3P35638 169 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 SOX18P35713 384 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 KIR2DL1P43626 348 aaPredicted RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 TUFMP49411 452 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 ACOT2P49753 483 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TAF6P49848 677 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 NFKB2Q00653 900 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 AMPD2Q01433 879 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TSPY1Q01534 308 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 CFHR1Q03591 330 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 MCL1Q07820 350 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 ST3GAL1Q11201 340 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 DNAJC3Q13217 504 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 DHX8Q14562 1220 aaKnown RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 ZNF268Q14587 947 aaPredicted RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 DHCR24Q15392 516 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 ANO4Q32M45 955 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 BMP2KLQ5H9B9 411 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 EOGTQ5NDL2 527 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 LY6G5CQ5SRR4 150 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 ZNF648Q5T619 568 aaPredicted RBP3.88□□□□□ -1.79
USP46-205ENST00000504078 SPATA1Q5VX52 437 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 HAUS3Q68CZ6 603 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 SLC39A4Q6P5W5 647 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 RUFY3Q7L099 469 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TMPRSS7Q7RTY8 843 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 METTL23Q86XA0 190 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 GATAD2AQ86YP4 633 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 FMNL3Q8IVF7 1028 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TP53INP2Q8IXH6 220 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 FAM20CQ8IXL6 584 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 PDCL2Q8N4E4 241 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 TMEM161BQ8NDZ6 487 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 ZSWIM2Q8NEG5 633 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 ERMNQ8TAM6 284 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 SPPL2BQ8TCT7 592 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 LRRC15Q8TF66 581 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 EXOC4Q96A65 974 aa3.88□□□□□ -1.79
USP46-205ENST00000504078 PNKPQ96T60 521 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms