RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 TOE1Q96GM8 510 aaKnown RBP16.68■□□□□ 0.26
DDR1-250ENST00000503628 GSDMAQ96QA5 445 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 XPO6Q96QU8 1125 aaKnown RBP16.68■□□□□ 0.26
DDR1-250ENST00000503628 GPR174Q9BXC1 333 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 TM7SF3Q9NS93 570 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 RMND1Q9NWS8 449 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 WSB2Q9NYS7 404 aaPredicted RBP16.68■□□□□ 0.26
DDR1-250ENST00000503628 GMIPQ9P107 970 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
DDR1-250ENST00000503628 KNL1Q8NG31 2342 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 KALRNO60229 2985 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 A8MXQ7 604 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 GFRA2O00451 464 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 GREM1O60565 184 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 PRB1P04280 392 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 FAM163BP0C2L3 166 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 ZNF883P0CG24 379 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 NCAM1P13591 858 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 MATKP42679 507 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 PGFP49763 221 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 TUBP50607 506 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 KNOP1Q1ED39 458 aaKnown RBP16.67■□□□□ 0.26
DDR1-250ENST00000503628 HLA-BQ31612 363 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 DBX2Q6ZNG2 339 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 HTR3DQ70Z44 454 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 B3GALNT2Q8NCR0 500 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 BAHD1Q8TBE0 780 aaPredicted RBP16.67■□□□□ 0.26
DDR1-250ENST00000503628 RHBDD1Q8TEB9 315 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
DDR1-250ENST00000503628 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 NACA2Q9H009 215 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 ITM2CQ9NQX7 267 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 IL37Q9NZH6 218 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 WDR35Q9P2L0 1181 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 PCDHA5Q9Y5H7 936 aa16.67■□□□□ 0.26
DDR1-250ENST00000503628 CABIN1Q9Y6J0 2220 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 MYH10P35580 1976 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 A0A087WV48 116 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 BCAT2O15382 392 aaPredicted RBP16.66■□□□□ 0.26
DDR1-250ENST00000503628 TGFB1I1O43294 461 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 DKK1O94907 266 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 CER1O95813 267 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 CISD3P0C7P0 127 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 ZDHHC11BP0C7U3 371 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 DGKGP49619 791 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 SLC5A3P53794 718 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 SNRPFP62306 86 aaKnown RBP16.66■□□□□ 0.26
DDR1-250ENST00000503628 TNNC1P63316 161 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 C19orf57Q0VDD7 668 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 CAMK2BQ13554 666 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 FUT11Q495W5 492 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 DCAF12L1Q5VU92 463 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 METTL3Q86U44 580 aaKnown RBP16.66■□□□□ 0.26
DDR1-250ENST00000503628 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 SCUBE3Q8IX30 993 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 CADM4Q8NFZ8 388 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 CDC6Q99741 560 aa16.66■□□□□ 0.26
DDR1-250ENST00000503628 USP36Q9P275 1121 aaKnown RBP16.66■□□□□ 0.26
DDR1-250ENST00000503628 FAM149AA5PLN7 773 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 KCNJ18B7U540 433 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 KIAA0391O15091 583 aaKnown RBP16.65■□□□□ 0.26
DDR1-250ENST00000503628 KIF20AO95235 890 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 TBX18O95935 607 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 IL27RAQ6UWB1 636 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 PAQR9Q6ZVX9 377 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 GALNT15Q8N3T1 639 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 RDH13Q8NBN7 331 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 MED10Q9BTT4 135 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 KLF16Q9BXK1 252 aaPredicted RBP16.65■□□□□ 0.26
DDR1-250ENST00000503628 MKRN2Q9H000 416 aaKnown RBP16.65■□□□□ 0.26
DDR1-250ENST00000503628 AGPAT3Q9NRZ7 376 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 MARK1Q9P0L2 795 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
DDR1-250ENST00000503628 STON1Q9Y6Q2 735 aa16.65■□□□□ 0.26
DDR1-250ENST00000503628 FAM92AA1XBS5 289 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 METTL12A8MUP2 240 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 FLRT2O43155 660 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 TLR5O60602 858 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
DDR1-250ENST00000503628 TNNI1P19237 187 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 TPMTP51580 245 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 ZNF658Q5TYW1 1059 aaPredicted RBP16.64■□□□□ 0.25
DDR1-250ENST00000503628 FAM35AQ86V20 835 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 GOLGA5Q8TBA6 731 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 BHMTQ93088 406 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 GTPBP4Q9BZE4 634 aaKnown RBP16.64■□□□□ 0.25
DDR1-250ENST00000503628 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 PLK2Q9NYY3 685 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 NXF1Q9UBU9 619 aaKnown RBP16.64■□□□□ 0.25
DDR1-250ENST00000503628 EIF2B4Q9UI10 523 aaKnown RBP16.64■□□□□ 0.25
DDR1-250ENST00000503628 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDR1-250ENST00000503628 BTBD3Q9Y2F9 522 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 PCDHGB2Q9Y5G2 931 aa16.64■□□□□ 0.25
DDR1-250ENST00000503628 TMEM131Q92545 1883 aa16.63■□□□□ 0.25
DDR1-250ENST00000503628 A0A1B0GVT2 93 aa16.63■□□□□ 0.25
DDR1-250ENST00000503628 CSNK1EP49674 416 aaKnown RBP16.63■□□□□ 0.25
DDR1-250ENST00000503628 CDH8P55286 799 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms