RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 C5orf67F2Z3F1 127 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 NRG2O14511 850 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 TTI1O43156 1089 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 IRAK2O43187 625 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 MSI1O43347 362 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 PRPSAP2O60256 369 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 CNPP09543 421 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 ATF2P15336 505 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 PECAM1P16284 738 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 ECHS1P30084 290 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 CTNNB1P35222 781 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 KCNJ1P48048 391 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 CXCR3P49682 368 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 CDH6P55285 790 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 DEUP1Q05D60 604 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SCAPQ12770 1279 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 TAF10Q12962 218 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 NME3Q13232 169 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SMC1AQ14683 1233 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 BOLA3Q53S33 107 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 ERMARDQ5T6L9 678 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 KAZNQ674X7 775 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 TPGS2Q68CL5 300 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 C8orf74Q6P047 294 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 MSANTD2Q6P1R3 559 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 WDR93Q6P2C0 686 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 LILRA6Q6PI73 481 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 DENND5BQ6ZUT9 1274 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 BBS12Q6ZW61 710 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 GSPT2Q8IYD1 628 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 GPR65Q8IYL9 337 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 PCDH19Q8TAB3 1148 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 DPF3Q92784 378 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 RNF166Q96A37 237 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 NTAN1Q96AB6 310 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 NAP1L3Q99457 506 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 LBHD1Q9BQE6 289 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 TRIM51Q9BSJ1 452 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SLITRK6Q9H5Y7 841 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 ALG13Q9NP73 1137 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 AAASQ9NRG9 546 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 DDIT4Q9NX09 232 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 COX16Q9P0S2 106 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 HSFX1Q9UBD0 423 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SAE1Q9UBE0 346 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 PCYOX1Q9UHG3 505 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SFMBT1Q9UHJ3 866 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 AMACRQ9UHK6 382 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 STAP1Q9ULZ2 295 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 AP4E1Q9UPM8 1137 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 EFR3BQ9Y2G0 817 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 YBX2Q9Y2T7 364 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 MFHAS1Q9Y4C4 1052 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 PCDHB12Q9Y5F1 795 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SNX10Q9Y5X0 201 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 C2orf16Q68DN1 1984 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CHD5Q8TDI0 1954 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SHROOM3Q8TF72 1996 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CARNS1A5YM72 827 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 C2orf71A6NGG8 1288 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ZNF487B1APH4 448 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM72CH0Y354 149 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CAPN9O14815 690 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 GRM6O15303 877 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 TP73O15350 636 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 TGM5O43548 720 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 LIASO43766 372 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CST8O60676 142 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 HEXIM1O94992 359 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 RTN3O95197 1032 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 TBX18O95935 607 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CA3P07451 260 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SPATA31D3P0C874 917 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 GOT1P17174 413 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 YWHAQP27348 245 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CHRNA3P32297 505 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ADRA1BP35368 520 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 IRS1P35568 1242 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 COILP38432 576 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 GGCXP38435 758 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 PBX2P40425 430 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FNTAP49354 379 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 RPL10AP62906 217 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 DYNLT1P63172 113 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SNX1Q13596 522 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 DPYSQ14117 519 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 PDK2Q15119 407 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 OASLQ15646 514 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CLUL1Q15846 466 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 GLE1Q53GS7 698 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ANKRD20A8PQ5CZ79 823 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM72AQ5TYM5 149 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC9A4Q6AI14 798 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM72DQ6L9T8 149 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CCDC137Q6PK04 289 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 NPNTQ6UXI9 565 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SPATA31D4Q6ZUB0 917 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 TMEM150AQ86TG1 271 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 MON1AQ86VX9 555 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms