RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 INHBEP58166 350 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 IFI35P80217 286 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 MPP3Q13368 585 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF268Q14587 947 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 CTXN3Q4LDR2 81 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF280DQ6N043 979 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF333Q96JL9 665 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 RPRD1AQ96P16 312 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 NR1H4Q96RI1 486 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 APOL5Q9BWW9 433 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ATP11BQ9Y2G3 1177 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 NCAM2O15394 837 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 USP1O94782 785 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 CLK1P49759 484 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF662Q6ZS27 426 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZDHHC17Q8IUH5 632 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 USP13Q92995 863 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 CINPQ9BW66 212 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 PAEPP09466 180 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 RUNX1T1Q06455 604 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 LRRC74AQ0VAA2 488 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 PDPK2PQ6A1A2 396 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF786Q8N393 782 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 CDV3Q9UKY7 258 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 EIF3LQ9Y262 564 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 C2orf81A6NN90 581 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 STK25O00506 426 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 TPST1O60507 370 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 PECAM1P16284 738 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ELK3P41970 407 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 PSEN2P49810 448 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 KIAA2013Q8IYS2 634 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 RRN3Q9NYV6 651 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 TOMM70O94826 608 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 WDR47O94967 919 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 PEX5P50542 639 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF177Q13360 481 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 TTLL9Q3SXZ7 439 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 FAM131BQ86XD5 332 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 TCP10LQ8TDR4 215 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 ZC4H2Q9NQZ6 224 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 MAGEB16A2A368 324 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 HEATR9A2RTY3 570 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 ASMTLO95671 621 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 KRT8P05787 483 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 ZCCHC18P0CG32 403 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 CYP2F1P24903 491 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 DEFA1P59665 94 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 DEFA3P59666 94 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 BMPR2Q13873 1038 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 HOMEZQ8IX15 550 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 BLOC1S5Q8TDH9 187 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 APOPT1Q96IL0 206 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 TMEM150BA6NC51 233 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 LGALS2P05162 132 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 SGO1Q5FBB7 561 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 AARS2Q5JTZ9 985 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 CCDC60Q8IWA6 550 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 DNAJC18Q9H819 358 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 PAIP2BQ9ULR5 123 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 RNF112Q9ULX5 631 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 SNX13Q9Y5W8 968 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 V9GYQ6 96 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 ADGRA3Q8IWK6 1321 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 F5H5T6 163 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 CSDE1O75534 798 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 GLRBP48167 497 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 NUP107P57740 925 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 IZUMO2Q6UXV1 221 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 GPR141Q7Z602 305 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 COLGALT1Q8NBJ5 622 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 BTBD10Q9BSF8 475 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 THUMPD3Q9BV44 507 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 SRRM3A6NNA2 597 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 FSBPO95073 299 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 MICU2Q8IYU8 434 aa16.61■□□□□ 0.25
HMGXB3-202ENST00000503427 E9PBE3 544 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 KLHL41O60662 606 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 VPS26AO75436 327 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 CACHD1Q5VU97 1274 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 TDRD5Q8NAT2 981 aaKnown RBP16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 CENPTQ96BT3 561 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 SYT15Q9BQS2 421 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 SIKE1Q9BRV8 207 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 CRLS1Q9UJA2 301 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 MPOP05164 745 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 BMP6P22004 513 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.6■□□□□ 0.255e-11■■■■□ 22.4
HMGXB3-202ENST00000503427 TRAPPC12Q8WVT3 735 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 WWOXQ9NZC7 414 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 IRF6O14896 467 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 SERPINE1P05121 402 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 NDST1P52848 882 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 GTF2BQ00403 316 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms