RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SOX9P48436 509 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 COG7P83436 770 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 PFKPQ01813 784 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 EML3Q32P44 896 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 TRIM67Q6ZTA4 783 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 CNGA4Q8IV77 575 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 CSGALNACT1Q8TDX6 532 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 TRIM62Q9BVG3 475 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 COX16Q9P0S2 106 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 WDFY4Q6ZS81 3184 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 A0A087X0T9 212 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 FAM86C2PA6NEL3 165 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 ATMINO43313 823 aaPredicted RBP17.2■□□□□ 0.34
SCLT1-205ENST00000503401 DAB1O75553 588 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 PDGFBP01127 241 aaPredicted RBP17.2■□□□□ 0.34
SCLT1-205ENST00000503401 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
SCLT1-205ENST00000503401 CALB1P05937 261 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 FAM228BP0C875 321 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 CORO1AP31146 461 aaKnown RBP17.2■□□□□ 0.34
SCLT1-205ENST00000503401 FLT3P36888 993 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 RUNX3Q13761 415 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 ARID5BQ14865 1188 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 TSR1Q2NL82 804 aaKnown RBP17.2■□□□□ 0.34
SCLT1-205ENST00000503401 TRNP1Q6NT89 227 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 BEND5Q7L4P6 421 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 MCOLN2Q8IZK6 566 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 EMC1Q8N766 993 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 TC2NQ8N9U0 490 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 CHP1Q99653 195 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 ADAM33Q9BZ11 813 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 ARHGEF3Q9NR81 526 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 WNT16Q9UBV4 365 aa17.2■□□□□ 0.34
SCLT1-205ENST00000503401 LSM7Q9UK45 103 aaKnown RBP17.2■□□□□ 0.34
SCLT1-205ENST00000503401 MIA3Q5JRA6 1907 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 TRUB2O95900 331 aaKnown RBP17.19■□□□□ 0.34
SCLT1-205ENST00000503401 TFE3P19532 575 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-205ENST00000503401 CD72P21854 359 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 RRM1P23921 792 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
SCLT1-205ENST00000503401 PDGFRLQ15198 375 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 HTR3DQ70Z44 454 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 VPS36Q86VN1 386 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 DENND1CQ8IV53 801 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 JOSD2Q8TAC2 188 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 DNASE1L2Q92874 299 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 FAM204AQ9H8W3 233 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 ZNHIT6Q9NWK9 470 aaKnown RBP17.19■□□□□ 0.34
SCLT1-205ENST00000503401 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■■□ 24
SCLT1-205ENST00000503401 CALCOCO1Q9P1Z2 691 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 TMEM59LQ9UK28 342 aa17.19■□□□□ 0.34
SCLT1-205ENST00000503401 HBS1LQ9Y450 684 aaKnown RBP17.19■□□□□ 0.34
SCLT1-205ENST00000503401 TMEM221A6NGB7 291 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 M0R296 226 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 GZMAP12544 262 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 SCNN1AP37088 669 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 MATKP42679 507 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 KPNA1P52294 538 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 TBX4P57082 545 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 CDK17Q00537 523 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 GFPT1Q06210 699 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 TRIP4Q15650 581 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 MLF2Q15773 248 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 ITPRIPL2Q3MIP1 535 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 Q6ZNB5 142 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 TPRG1Q6ZUI0 275 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 ADGRG2Q8IZP9 1017 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 ATP2A3Q93084 1043 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 PLD4Q96BZ4 506 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 SERPINB11Q96P15 392 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 ECT2Q9H8V3 914 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 TRPV5Q9NQA5 729 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 AGO1Q9UL18 857 aaKnown RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 PIAS3Q9Y6X2 628 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 SLC9A3R1O14745 358 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 RTN2O75298 545 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 IGLV3-25P01717 112 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 NOS2P35228 1153 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 VCPP55072 806 aaKnown RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 NME3Q13232 169 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 OTUD1Q5VV17 481 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 C3orf20Q8ND61 904 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 FCRL2Q96LA5 508 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-205ENST00000503401 CFAP57Q96MR6 1250 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 SELENOOQ9BVL4 669 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 DEF6Q9H4E7 631 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 DDIT4Q9NX09 232 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 WDR35Q9P2L0 1181 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 TBC1D14Q9P2M4 693 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 TLR6Q9Y2C9 796 aa17.18■□□□□ 0.34
SCLT1-205ENST00000503401 ZDBF2Q9HCK1 2354 aa17.17■□□□□ 0.34
SCLT1-205ENST00000503401 TCRBV5S1A1TA0A578 114 aa17.17■□□□□ 0.34
SCLT1-205ENST00000503401 M0QYT0 321 aa17.17■□□□□ 0.34
SCLT1-205ENST00000503401 IRAK2O43187 625 aa17.17■□□□□ 0.34
SCLT1-205ENST00000503401 IGLV3-27P01718 113 aa17.17■□□□□ 0.34
SCLT1-205ENST00000503401 CYP17A1P05093 508 aa17.17■□□□□ 0.34
SCLT1-205ENST00000503401 KRT3P12035 628 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms