RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SNX2O60749 519 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 OAZ2O95190 189 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 VNN1O95497 513 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 FESP07332 822 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 SRGAP2BP0DMP2 458 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 YY1P25490 414 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 MST1P26927 711 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 LIPAP38571 399 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 MTHFSP49914 203 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 CLCN2P51788 898 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 GPS1Q13098 491 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 MAPKAPK3Q16644 382 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 SLC5A9Q2M3M2 681 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZNF260Q3ZCT1 412 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 INO80DQ53TQ3 878 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 TREML2Q5T2D2 321 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 ARL6IP4Q66PJ3 421 aaKnown RBP2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 CEP85Q6P2H3 762 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 MRPL10Q7Z7H8 261 aaKnown RBP2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 RASAL3Q86YV0 1011 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 GALNT16Q8N428 558 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 MYCT1Q8N699 235 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 STYXQ8WUJ0 223 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 NSMCE1Q8WV22 266 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCT6BQ92526 530 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 FKBP10Q96AY3 582 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZNF668Q96K58 619 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 RMDN3Q96TC7 470 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 HERPUD2Q9BSE4 406 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 SERTAD4Q9NUC0 356 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 EHD3Q9NZN3 535 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 LRFN1Q9P244 771 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 DKK3Q9UBP4 350 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCDC187A0A096LP49 1063 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ACKR2O00590 384 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZSCAN9O15535 394 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 USP1O94782 785 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TNFRSF6BO95407 300 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 HNRNPCP07910 306 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 IL6RP08887 468 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ARP10275 920 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZFXP17010 805 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 SERPINF1P36955 418 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 GRK6P43250 576 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCT8P50990 548 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 PDE1AP54750 535 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TIRAPP58753 221 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TIAL1Q01085 375 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 NSUN2Q08J23 767 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 PTK2BQ14289 1009 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 PLAC9Q5JTB6 97 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZNF618Q5T7W0 954 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TEDDM1Q5T9Z0 273 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ABLIM2Q6H8Q1 611 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TLDC1Q6P9B6 456 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 CLEC9AQ6UXN8 241 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 CAND1Q86VP6 1230 aaKnown RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 RASGRP3Q8IV61 690 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 FSTL5Q8N475 847 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 NKAPQ8N5F7 415 aaKnown RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 METTL25Q8N6Q8 603 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 C11orf44Q8N8P7 122 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAM71BQ8TC56 605 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ABHD5Q8WTS1 349 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 XAGE5Q8WWM1 108 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 SOCS4Q8WXH5 440 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TBC1D5Q92609 795 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 GRAMD1AQ96CP6 724 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 R3HDM4Q96D70 268 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 LTV1Q96GA3 475 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZDHHC12Q96GR4 267 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 PPP1R10Q96QC0 940 aaKnown RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 PRPF18Q99633 342 aaKnown RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 SH2D3AQ9BRG2 576 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 DPCDQ9BVM2 203 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 VN1R3Q9BXE9 311 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZCWPW1Q9H0M4 648 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 MYLK2Q9H1R3 596 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 EPS8L2Q9H6S3 715 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 AGO4Q9HCK5 861 aaKnown RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TMEM8AQ9HCN3 771 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 DACT1Q9NYF0 836 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 GRHPRQ9UBQ7 328 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 VPS51Q9UID3 782 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 DRG1Q9Y295 367 aaKnown RBP2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 TTC3P53804 2025 aa2.84□□□□□ -1.95
HMGB1P35-201ENST00000503360 FER1L4A9Z1Z3 1794 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 HMGB1P1B2RPK0 211 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 TISP43B9A030 160 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 J3KTA2 159 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 PSMD9O00233 223 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SYT5O00445 386 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 EXOC5O00471 708 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SOCS2O14508 198 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 ASNA1O43681 348 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 NXPH3O95157 252 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 VIPP01282 170 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 NR2F6P10588 404 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 NPPBP16860 134 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms